RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ADAM17P78536 824 aa20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 NFXL1Q6ZNB6 911 aa20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 SEPT1Q8WYJ6 367 aa20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 C17orf80Q9BSJ5 609 aa20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 UBE2ZQ9H832 354 aaPredicted RBP20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 SETD4Q9NVD3 440 aa20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 SUPT16HQ9Y5B9 1047 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 RBM8AQ9Y5S9 174 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-227ENST00000602011 BAZ2BQ9UIF8 2168 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-227ENST00000602011 SEMA3FQ13275 785 aa20.48■□□□□ 0.87
SHKBP1-227ENST00000602011 USP17L6PQ6QN14 398 aa20.48■□□□□ 0.87
SHKBP1-227ENST00000602011 MRPL38Q96DV4 380 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-227ENST00000602011 YME1L1Q96TA2 773 aa20.48■□□□□ 0.87
SHKBP1-227ENST00000602011 EHMT1Q9H9B1 1298 aa20.48■□□□□ 0.87
SHKBP1-227ENST00000602011 NCK2O43639 380 aa20.47■□□□□ 0.87
SHKBP1-227ENST00000602011 PRC1O43663 620 aa20.47■□□□□ 0.87
SHKBP1-227ENST00000602011 HOXD11P31277 338 aaPredicted RBP20.47■□□□□ 0.87
SHKBP1-227ENST00000602011 LEXMQ3ZCV2 418 aa20.47■□□□□ 0.87
SHKBP1-227ENST00000602011 OSBPL7Q9BZF2 842 aa20.47■□□□□ 0.87
SHKBP1-227ENST00000602011 BCAS3Q9H6U6 928 aa20.47■□□□□ 0.87
SHKBP1-227ENST00000602011 ERAP1Q9NZ08 941 aa20.47■□□□□ 0.87
SHKBP1-227ENST00000602011 HCN4Q9Y3Q4 1203 aa20.47■□□□□ 0.87
SHKBP1-227ENST00000602011 RWDD3Q9Y3V2 267 aa20.47■□□□□ 0.87
SHKBP1-227ENST00000602011 SIP14410 1827 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 H3BNC9 293 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 RB1P06400 928 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 KCNA5P22460 613 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 ARHGAP4P98171 946 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 EPC2Q52LR7 807 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 TIGD5Q53EQ6 642 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 UTP14CQ5TAP6 766 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 PIBF1Q8WXW3 757 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 IFIH1Q9BYX4 1025 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 SMARCAD1Q9H4L7 1026 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 SLC12A7Q9Y666 1083 aa20.46■□□□□ 0.87
SHKBP1-227ENST00000602011 SPDYE3A6NKU9 549 aa20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 SH2B2O14492 632 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 IL9P15248 144 aa20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 TCF7P36402 384 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 SYNE3Q6ZMZ3 975 aa20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 SRBD1Q8N5C6 995 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 LMBR1Q8WVP7 490 aa20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 IL17RAQ96F46 866 aa20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 TAF6LQ9Y6J9 622 aa20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 SQORQ9Y6N5 450 aa20.45■□□□□ 0.86
SHKBP1-227ENST00000602011 RRN3P2A6NIE6 340 aa20.44■□□□□ 0.86
SHKBP1-227ENST00000602011 TMEM192Q8IY95 271 aa20.44■□□□□ 0.86
SHKBP1-227ENST00000602011 FANCBQ8NB91 859 aa20.44■□□□□ 0.86
SHKBP1-227ENST00000602011 FAM50BQ9Y247 325 aa20.44■□□□□ 0.86
SHKBP1-227ENST00000602011 UBIAD1Q9Y5Z9 338 aa20.44■□□□□ 0.86
SHKBP1-227ENST00000602011 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 PI4K2BG5E9Z4 385 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 GPR37L1O60883 481 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 CTSHP09668 335 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 KCNA2P16389 499 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 PPFIA1Q13136 1202 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 GPM6BQ13491 265 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 MTMR1Q13613 665 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 RNF20Q5VTR2 975 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 SGMS1Q86VZ5 419 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 GLG1Q92896 1179 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 LMAN2LQ9H0V9 348 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 GLT8D2Q9H1C3 349 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 JADE2Q9NQC1 790 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 MICAL3Q7RTP6 2002 aa20.43■□□□□ 0.86
SHKBP1-227ENST00000602011 MBLAC1A4D2B0 266 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 UPP2O95045 317 aa20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 FOSP01100 380 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 ITGB5P18084 799 aa20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 TRIM50Q86XT4 487 aa20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 FAM178BQ8IXR5 827 aa20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 FIBCD1Q8N539 461 aa20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 BANK1Q8NDB2 785 aa20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 MYL10Q9BUA6 226 aa20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 LSG1Q9H089 658 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 RBM28Q9NW13 759 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-227ENST00000602011 GSTTP1A0A1W2PQM5 241 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 C5orf67F2Z3F1 127 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 H3BQ06 376 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 ATP9AO75110 1047 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 PLEKHA8P1O95397 391 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 CHRNA1P02708 482 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 SP4Q02446 784 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 NECTIN1Q15223 517 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 IER5Q5VY09 327 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 GJD3Q8N144 294 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 FTHL17Q9BXU8 183 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 AZI2Q9H6S1 392 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 TUBE1Q9UJT0 475 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 PCDHA6Q9UN73 950 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 TELO2Q9Y4R8 837 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 PCDHA8Q9Y5H6 950 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 MUC6Q6W4X9 2439 aa20.41■□□□□ 0.86
SHKBP1-227ENST00000602011 hCG_1984214I3L0E3 225 aa20.4■□□□□ 0.86
SHKBP1-227ENST00000602011 SLC27A2O14975 620 aa20.4■□□□□ 0.86
SHKBP1-227ENST00000602011 SSTR3P32745 418 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-227ENST00000602011 COL4A6Q14031 1691 aa20.4■□□□□ 0.86
SHKBP1-227ENST00000602011 GRIK4Q16099 956 aa20.4■□□□□ 0.86
SHKBP1-227ENST00000602011 CREB3L3Q68CJ9 461 aa20.4■□□□□ 0.86
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