RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 BMP15O95972 392 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 PGK1P00558 417 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 CYP3A7P24462 503 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 LRRC41Q15345 812 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 DGKDQ16760 1214 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 CYFIP1Q7L576 1253 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 SLFN12Q8IYM2 578 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 FSIP1Q8NA03 581 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 PPTC7Q8NI37 304 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 MRPS27Q92552 414 aaKnown RBP11.36□□□□□ -0.59
UPF1-213ENST00000601981 SPATA33Q96N06 139 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 NUP62CLQ9H1M0 184 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 CLSTN2Q9H4D0 955 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 GRPEL1Q9HAV7 217 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 AGO4Q9HCK5 861 aaKnown RBP11.36□□□□□ -0.59
UPF1-213ENST00000601981 JPH1Q9HDC5 661 aaPredicted RBP11.36□□□□□ -0.59
UPF1-213ENST00000601981 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.36□□□□□ -0.59
UPF1-213ENST00000601981 DACT1Q9NYF0 836 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 PKD2L1Q9P0L9 805 aa11.36□□□□□ -0.59
UPF1-213ENST00000601981 POTEFA5A3E0 1075 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 ADCY6O43306 1168 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 NEMFO60524 1076 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 ARP10275 920 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 KCNA2P16389 499 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 ATP2B1P20020 1258 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 TOB1P50616 345 aaPredicted RBP11.35□□□□□ -0.59
UPF1-213ENST00000601981 NKX3-2P78367 333 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 KRT76Q01546 638 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 FAM160A1Q05DH4 1040 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 ARHGAP1Q07960 439 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 SEMA3FQ13275 785 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 CALCRLQ16602 461 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 EARS2Q5JPH6 523 aaKnown RBP11.35□□□□□ -0.59
UPF1-213ENST00000601981 TTC38Q5R3I4 469 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 AXDND1Q5T1B0 1012 aaPredicted RBP11.35□□□□□ -0.59
UPF1-213ENST00000601981 GJC2Q5T442 439 aaPredicted RBP11.35□□□□□ -0.59
UPF1-213ENST00000601981 PRPF38BQ5VTL8 546 aaKnown RBP11.35□□□□□ -0.59
UPF1-213ENST00000601981 RBM43Q6ZSC3 357 aaKnown RBP11.35□□□□□ -0.59
UPF1-213ENST00000601981 NECAB2Q7Z6G3 386 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 CYP2W1Q8TAV3 490 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 COPS5Q92905 334 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 FAM20AQ96MK3 541 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 GLT1D1Q96MS3 346 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 MBOAT7Q96N66 472 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 RIT2Q99578 217 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 TEKT3Q9BXF9 490 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 TSPY26PQ9H489 355 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 SLC9A2Q9UBY0 812 aa11.35□□□□□ -0.59
UPF1-213ENST00000601981 MKI67P46013 3256 aaKnown RBP11.34□□□□□ -0.59
UPF1-213ENST00000601981 FAM237AA0A1B0GTK4 181 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 FAM205CA6NFA0 338 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 A6NJR5 290 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 MSH4O15457 936 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 GAS7O60861 476 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 CUTAO60888 179 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 NR1I2O75469 434 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 MMP3P08254 477 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 CMA1P23946 247 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 MCM7P33993 719 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 SP2Q02086 613 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 SP4Q02446 784 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 KCNA10Q16322 511 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 LRCH2Q5VUJ6 765 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 SMAP1Q8IYB5 467 aaPredicted RBP11.34□□□□□ -0.59
UPF1-213ENST00000601981 KLHDC9Q8NEP7 349 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 ENGASEQ8NFI3 743 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 AFG1LQ8WV93 481 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 KATNAL1Q9BW62 490 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 SEZ6LQ9BYH1 1024 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 GOLPH3LQ9H4A5 285 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 C11orf49Q9H6J7 331 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 ZNF215Q9UL58 517 aaPredicted RBP11.34□□□□□ -0.59
UPF1-213ENST00000601981 SCN10AQ9Y5Y9 1956 aa11.34□□□□□ -0.59
UPF1-213ENST00000601981 LAD1O00515 517 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 CTAGE5O15320 804 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 SLC37A4O43826 429 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 SORBS3O60504 671 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 KINO60870 393 aaKnown RBP11.33□□□□□ -0.6
UPF1-213ENST00000601981 ATP9AO75110 1047 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 PPFIA4O75335 1185 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 ASGR1P07306 291 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 MYL3P08590 195 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 EN2P19622 333 aaPredicted RBP11.33□□□□□ -0.6
UPF1-213ENST00000601981 SFNP31947 248 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 JAK3P52333 1124 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 ACLYP53396 1101 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 BEX3Q00994 111 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 SNW1Q13573 536 aaKnown RBP11.33□□□□□ -0.6
UPF1-213ENST00000601981 TMEM266Q2M3C6 531 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 ZNF746Q6NUN9 644 aaPredicted RBP11.33□□□□□ -0.6
UPF1-213ENST00000601981 KRI1Q8N9T8 703 aaKnown RBP11.33□□□□□ -0.6
UPF1-213ENST00000601981 SEPT1Q8WYJ6 367 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 SLC5A5Q92911 643 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 VTI1AQ96AJ9 217 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 LENG9Q96B70 501 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 MTG1Q9BT17 334 aaPredicted RBP11.33□□□□□ -0.6
UPF1-213ENST00000601981 HTATIP2Q9BUP3 242 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 RAB34Q9BZG1 259 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms