RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 TUT1Q9H6E5 874 aaKnown RBP14.54□□□□□ -0.08
USE1-209ENST00000601592 NFASCO94856 1347 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 TIMP1P01033 207 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 MARK3P27448 753 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 CIITAP33076 1130 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 CYP2C18P33260 490 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 USP11P51784 963 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 ACTR2P61160 394 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 NR5A1Q13285 461 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 LETM2Q2VYF4 491 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 KRT40Q6A162 431 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 TMX3Q96JJ7 454 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 C8orf76Q96K31 380 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 GTF2IRD1Q9UHL9 959 aa14.53□□□□□ -0.08
USE1-209ENST00000601592 UMODL1Q5DID0 1318 aa14.52□□□□□ -0.08
USE1-209ENST00000601592 GSTTP1A0A1W2PQM5 241 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 HAS3O00219 553 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 TDP2O95551 362 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 MMP1P03956 469 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 MCM2P49736 904 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 CCL23P55773 120 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 FPGSQ05932 587 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 SAFBQ15424 915 aaKnown RBP eCLIP14.52□□□□□ -0.09
USE1-209ENST00000601592 SESTD1Q86VW0 696 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 DIS3L2Q8IYB7 885 aaKnown RBP14.52□□□□□ -0.09
USE1-209ENST00000601592 IL27Q8NEV9 243 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 NOC4LQ9BVI4 516 aaKnown RBP14.52□□□□□ -0.09
USE1-209ENST00000601592 AZI2Q9H6S1 392 aa14.52□□□□□ -0.09
USE1-209ENST00000601592 FAM205CA6NFA0 338 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 BACH1O14867 736 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 SMIM10L2AP0DMW4 78 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 SMIM10L2BP0DMW5 78 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 BMP8BP34820 402 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 HABP4Q5JVS0 413 aaKnown RBP14.51□□□□□ -0.09
USE1-209ENST00000601592 NEK8Q86SG6 692 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 TMEM199Q8N511 208 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 LENG9Q96B70 501 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 PRO3102Q9H379 93 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 SMARCAD1Q9H4L7 1026 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 TBC1D22BQ9NU19 505 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 DDX25Q9UHL0 483 aaKnown RBP14.51□□□□□ -0.09
USE1-209ENST00000601592 SAMM50Q9Y512 469 aa14.51□□□□□ -0.09
USE1-209ENST00000601592 C17orf102A2RUQ5 167 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 BTBD18B2RXH4 712 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 MSH4O15457 936 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 CHMP2AO43633 222 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 EDIL3O43854 480 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 CCNT1O60563 726 aaKnown RBP14.5□□□□□ -0.09
USE1-209ENST00000601592 GAS7O60861 476 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 CCNE2O96020 404 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 CSF2RAP15509 400 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 ZNF200P98182 395 aaPredicted RBP14.5□□□□□ -0.09
USE1-209ENST00000601592 PPIGQ13427 754 aaKnown RBP eCLIP14.5□□□□□ -0.098e-6■■■■□ 22.7
USE1-209ENST00000601592 GNL2Q13823 731 aaKnown RBP14.5□□□□□ -0.09
USE1-209ENST00000601592 EARS2Q5JPH6 523 aaKnown RBP14.5□□□□□ -0.09
USE1-209ENST00000601592 LRCH2Q5VUJ6 765 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 MFSD5Q6N075 450 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 TDHQ8IZJ6 230 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 CCDC155Q8N6L0 562 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 RETREG2Q8NC44 543 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 ATP6V0A1Q93050 837 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 GJA10Q969M2 543 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 ERAP1Q9NZ08 941 aa14.5□□□□□ -0.09
USE1-209ENST00000601592 EMSYQ7Z589 1322 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 SLC37A4O43826 429 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 MARCH6O60337 910 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 KRT76Q01546 638 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 BFSP2Q13515 415 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 Q4G0T1 1027 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 FAM160B1Q5W0V3 765 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 MIS18BP1Q6P0N0 1132 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 SCLYQ96I15 445 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 TEKT3Q9BXF9 490 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 WNT8AQ9H1J5 351 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 RNPEPQ9H4A4 650 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 SETD4Q9NVD3 440 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 TRPC6Q9Y210 931 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 KIF3AQ9Y496 699 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 EVPLQ92817 2033 aa14.49□□□□□ -0.09
USE1-209ENST00000601592 CYP3A7-CYP3A51PA0A087WV96 503 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 A0A1W2PPC1 479 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 DHX15O43143 795 aaKnown RBP14.48□□□□□ -0.09
USE1-209ENST00000601592 LGR5O75473 907 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 ACRP10323 421 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 GNAT1P11488 350 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 GCFC2P16383 781 aaKnown RBP14.48□□□□□ -0.09
USE1-209ENST00000601592 ATP2B1P20020 1258 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 CYP3A7P24462 503 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 STAT5BP51692 787 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 EPHB4P54760 987 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 IGBP1P78318 339 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 PPFIA1Q13136 1202 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 HIC1Q14526 733 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 ZNF746Q6NUN9 644 aaPredicted RBP14.48□□□□□ -0.09
USE1-209ENST00000601592 MOXD1Q6UVY6 613 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 TRMT1LQ7Z2T5 733 aaKnown RBP14.48□□□□□ -0.09
USE1-209ENST00000601592 SLC5A5Q92911 643 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 PCYT2Q99447 389 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 NAP1L4Q99733 375 aaKnown RBP14.48□□□□□ -0.09
USE1-209ENST00000601592 SMC3Q9UQE7 1217 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms