RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SCG2P13521 617 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 PSMA5P28066 241 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 THPOP40225 353 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 AP3B2Q13367 1082 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 ADGRE1Q14246 886 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 CYP2W1Q8TAV3 490 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 SEPT1Q8WYJ6 367 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 GAS2L1Q99501 681 aaPredicted RBP25.91■■□□□ 1.74
SSBP4-209ENST00000601357 ANO3Q9BYT9 981 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 KCNH7Q9NS40 1196 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 SETD4Q9NVD3 440 aa25.91■■□□□ 1.74
SSBP4-209ENST00000601357 EMSYQ7Z589 1322 aa25.9■■□□□ 1.74
SSBP4-209ENST00000601357 CA3P07451 260 aa25.9■■□□□ 1.74
SSBP4-209ENST00000601357 GNAT1P11488 350 aa25.9■■□□□ 1.74
SSBP4-209ENST00000601357 SREBF1P36956 1147 aa25.9■■□□□ 1.74
SSBP4-209ENST00000601357 PKN1Q16512 942 aa25.9■■□□□ 1.74
SSBP4-209ENST00000601357 LMBR1Q8WVP7 490 aa25.9■■□□□ 1.74
SSBP4-209ENST00000601357 TMEM260Q9NX78 707 aa25.9■■□□□ 1.74
SSBP4-209ENST00000601357 REV3LO60673 3130 aa25.9■■□□□ 1.74
SSBP4-209ENST00000601357 ABHD14A-ACY1A0A1B0GW23 586 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 ESYT2A0FGR8 921 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 RSPH10B2B2RC85 870 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 RBAK-RBAKDNI3L0D1 243 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 DLL1O00548 723 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 CAND2O75155 1236 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 RSPH10BP0C881 870 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 KCNJ6P48051 423 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 NTRK3Q16288 839 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 USP38Q8NB14 1042 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 ZSWIM6Q9HCJ5 1215 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 PKD2L1Q9P0L9 805 aa25.89■■□□□ 1.74
SSBP4-209ENST00000601357 NRCAMQ92823 1304 aa25.88■■□□□ 1.73
SSBP4-209ENST00000601357 PRPF3O43395 683 aaKnown RBP25.88■■□□□ 1.73
SSBP4-209ENST00000601357 DEFB103AP81534 67 aa25.88■■□□□ 1.73
SSBP4-209ENST00000601357 MKRN4PQ13434 485 aaPredicted RBP25.88■■□□□ 1.73
SSBP4-209ENST00000601357 CEP55Q53EZ4 464 aa25.88■■□□□ 1.73
SSBP4-209ENST00000601357 RUFY3Q7L099 469 aa25.88■■□□□ 1.73
SSBP4-209ENST00000601357 CRYGNQ8WXF5 182 aa25.88■■□□□ 1.73
SSBP4-209ENST00000601357 ZMYND12Q9H0C1 365 aa25.88■■□□□ 1.73
SSBP4-209ENST00000601357 JPH1Q9HDC5 661 aaPredicted RBP25.88■■□□□ 1.73
SSBP4-209ENST00000601357 NFASCO94856 1347 aa25.88■■□□□ 1.73
SSBP4-209ENST00000601357 MEIS1O00470 390 aa25.87■■□□□ 1.73
SSBP4-209ENST00000601357 ADAMTS3O15072 1205 aa25.87■■□□□ 1.73
SSBP4-209ENST00000601357 LGR5O75473 907 aa25.87■■□□□ 1.73
SSBP4-209ENST00000601357 PDIA3P30101 505 aaKnown RBP25.87■■□□□ 1.73
SSBP4-209ENST00000601357 IKBKEQ14164 716 aa25.87■■□□□ 1.73
SSBP4-209ENST00000601357 ERAP1Q9NZ08 941 aa25.87■■□□□ 1.73
SSBP4-209ENST00000601357 SLC9A2Q9UBY0 812 aa25.87■■□□□ 1.73
SSBP4-209ENST00000601357 EFCAB14O75071 495 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 ARHGEF15O94989 841 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 ARP10275 920 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 ARHGAP4P98171 946 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 TOB2Q14106 344 aaPredicted RBP25.86■■□□□ 1.73
SSBP4-209ENST00000601357 PLEKHG4Q58EX7 1191 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 NIPA1Q7RTP0 329 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 PHKBQ93100 1093 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 PCYT2Q99447 389 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 SMARCAD1Q9H4L7 1026 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 AGO4Q9HCK5 861 aaKnown RBP25.86■■□□□ 1.73
SSBP4-209ENST00000601357 MICAL3Q7RTP6 2002 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 KAT6AQ92794 2004 aa25.86■■□□□ 1.73
SSBP4-209ENST00000601357 KIF28PB7ZC32 967 aa25.85■■□□□ 1.73
SSBP4-209ENST00000601357 IFNAR1P17181 557 aa25.85■■□□□ 1.73
SSBP4-209ENST00000601357 TAP1Q03518 808 aa25.85■■□□□ 1.73
SSBP4-209ENST00000601357 ITGB3BPQ13352 177 aaPredicted RBP25.85■■□□□ 1.73
SSBP4-209ENST00000601357 FAM26DQ5JW98 314 aa25.85■■□□□ 1.73
SSBP4-209ENST00000601357 TMCO2Q7Z6W1 182 aaPredicted RBP25.85■■□□□ 1.73
SSBP4-209ENST00000601357 RPAINQ86UA6 219 aa25.85■■□□□ 1.73
SSBP4-209ENST00000601357 RNF26Q9BY78 433 aaPredicted RBP25.85■■□□□ 1.73
SSBP4-209ENST00000601357 TM6SF1Q9BZW5 370 aa25.85■■□□□ 1.73
SSBP4-209ENST00000601357 PPP4R2Q9NY27 417 aa25.85■■□□□ 1.73
SSBP4-209ENST00000601357 MYO9BQ13459 2157 aa25.85■■□□□ 1.73
SSBP4-209ENST00000601357 SIP14410 1827 aa25.84■■□□□ 1.73
SSBP4-209ENST00000601357 TLL1O43897 1013 aa25.84■■□□□ 1.73
SSBP4-209ENST00000601357 JAKMIP3Q5VZ66 844 aa25.84■■□□□ 1.73
SSBP4-209ENST00000601357 MCTP2Q6DN12 878 aa25.84■■□□□ 1.73
SSBP4-209ENST00000601357 DBF4BQ8NFT6 615 aa25.84■■□□□ 1.73
SSBP4-209ENST00000601357 CCDC12Q8WUD4 166 aaPredicted RBP25.84■■□□□ 1.73
SSBP4-209ENST00000601357 GLG1Q92896 1179 aa25.84■■□□□ 1.73
SSBP4-209ENST00000601357 SDF4Q9BRK5 362 aa25.84■■□□□ 1.73
SSBP4-209ENST00000601357 OSBPL7Q9BZF2 842 aa25.84■■□□□ 1.73
SSBP4-209ENST00000601357 IGLV3-22A0A075B6J6 115 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 MBLAC1A4D2B0 266 aaPredicted RBP25.83■■□□□ 1.73
SSBP4-209ENST00000601357 FAM86B1E9PN63 330 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 GJB5O95377 273 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 CYP3A4P08684 503 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 FAM86B2P0C5J1 330 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 MARK3P27448 753 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 ACTR2P61160 394 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 PPFIA1Q13136 1202 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 MARCH8Q5T0T0 291 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 ERICH6BQ5W0A0 696 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 NCOA5Q9HCD5 579 aaKnown RBP25.83■■□□□ 1.73
SSBP4-209ENST00000601357 C6orf50Q9HD87 102 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 CYP46A1Q9Y6A2 500 aa25.83■■□□□ 1.73
SSBP4-209ENST00000601357 ATG7O95352 703 aa25.82■■□□□ 1.72
SSBP4-209ENST00000601357 CTSHP09668 335 aa25.82■■□□□ 1.72
SSBP4-209ENST00000601357 GRIK4Q16099 956 aa25.82■■□□□ 1.72
SSBP4-209ENST00000601357 RUFY4Q6ZNE9 571 aa25.82■■□□□ 1.72
SSBP4-209ENST00000601357 REXO1Q8N1G1 1221 aaKnown RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms