RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 INPP4AQ96PE3 977 aaPredicted RBP19.41■□□□□ 0.7
USE1-208ENST00000600970 C11orf84Q9BUA3 381 aaPredicted RBP19.41■□□□□ 0.7
USE1-208ENST00000600970 UPF3BQ9BZI7 483 aaKnown RBP19.41■□□□□ 0.7
USE1-208ENST00000600970 OSBPL3Q9H4L5 887 aa19.41■□□□□ 0.7
USE1-208ENST00000600970 KAT6AQ92794 2004 aa19.41■□□□□ 0.7
USE1-208ENST00000600970 SPATA31C2B4DYI2 1134 aa19.4■□□□□ 0.7
USE1-208ENST00000600970 STAM2O75886 525 aa19.4■□□□□ 0.7
USE1-208ENST00000600970 CHRNA1P02708 482 aa19.4■□□□□ 0.7
USE1-208ENST00000600970 ARHGAP4P98171 946 aa19.4■□□□□ 0.7
USE1-208ENST00000600970 TRAF1Q13077 416 aa19.4■□□□□ 0.7
USE1-208ENST00000600970 UTP14CQ5TAP6 766 aaKnown RBP19.4■□□□□ 0.7
USE1-208ENST00000600970 PLEKHM2Q8IWE5 1019 aa19.4■□□□□ 0.7
USE1-208ENST00000600970 RC3H2Q9HBD1 1191 aaKnown RBP19.4■□□□□ 0.7
USE1-208ENST00000600970 RTEL1Q9NZ71 1219 aa19.4■□□□□ 0.7
USE1-208ENST00000600970 ZNF215Q9UL58 517 aaPredicted RBP19.4■□□□□ 0.7
USE1-208ENST00000600970 RWDD3Q9Y3V2 267 aa19.4■□□□□ 0.7
USE1-208ENST00000600970 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
USE1-208ENST00000600970 ADGRA3Q8IWK6 1321 aa19.4■□□□□ 0.7
USE1-208ENST00000600970 HIP1O00291 1037 aa19.39■□□□□ 0.69
USE1-208ENST00000600970 FIBPO43427 364 aa19.39■□□□□ 0.69
USE1-208ENST00000600970 CYTH3O43739 400 aa19.39■□□□□ 0.69
USE1-208ENST00000600970 GHRP10912 638 aa19.39■□□□□ 0.69
USE1-208ENST00000600970 GTF2F1P35269 517 aaKnown RBP eCLIP19.39■□□□□ 0.69
USE1-208ENST00000600970 GRM4Q14833 912 aa19.39■□□□□ 0.69
USE1-208ENST00000600970 B4GALNT3Q6L9W6 998 aa19.39■□□□□ 0.69
USE1-208ENST00000600970 CLP1Q92989 425 aaKnown RBP19.39■□□□□ 0.69
USE1-208ENST00000600970 EHMT1Q9H9B1 1298 aa19.39■□□□□ 0.69
USE1-208ENST00000600970 MUTYHQ9UIF7 546 aa19.39■□□□□ 0.69
USE1-208ENST00000600970 BAZ2BQ9UIF8 2168 aaKnown RBP19.39■□□□□ 0.69
USE1-208ENST00000600970 PNMA6FA0A0J9YX94 578 aa19.38■□□□□ 0.69
USE1-208ENST00000600970 TBX10O75333 385 aa19.38■□□□□ 0.69
USE1-208ENST00000600970 MGAT3Q09327 533 aa19.38■□□□□ 0.69
USE1-208ENST00000600970 HERC4Q5GLZ8 1057 aaPredicted RBP19.38■□□□□ 0.69
USE1-208ENST00000600970 RUFY4Q6ZNE9 571 aa19.38■□□□□ 0.69
USE1-208ENST00000600970 SMC5Q8IY18 1101 aa19.38■□□□□ 0.69
USE1-208ENST00000600970 NRCAMQ92823 1304 aa19.38■□□□□ 0.69
USE1-208ENST00000600970 ZNF689Q96CS4 500 aaPredicted RBP19.38■□□□□ 0.69
USE1-208ENST00000600970 POP1Q99575 1024 aaKnown RBP19.38■□□□□ 0.69
USE1-208ENST00000600970 KIAA1671Q9BY89 1806 aa19.37■□□□□ 0.69
USE1-208ENST00000600970 ENPP3O14638 875 aa19.37■□□□□ 0.69
USE1-208ENST00000600970 LINC01565O15544 149 aa19.37■□□□□ 0.69
USE1-208ENST00000600970 SP4Q02446 784 aa19.37■□□□□ 0.69
USE1-208ENST00000600970 LPIN1Q14693 890 aa19.37■□□□□ 0.69
USE1-208ENST00000600970 RNF135Q8IUD6 432 aa19.37■□□□□ 0.69
USE1-208ENST00000600970 MFSD14AQ96MC6 490 aa19.37■□□□□ 0.69
USE1-208ENST00000600970 IL25Q9H293 177 aa19.37■□□□□ 0.69
USE1-208ENST00000600970 IGFLR1Q9H665 355 aa19.37■□□□□ 0.69
USE1-208ENST00000600970 MYO7AQ13402 2215 aa19.36■□□□□ 0.69
USE1-208ENST00000600970 CSPG5O95196 566 aa19.36■□□□□ 0.69
USE1-208ENST00000600970 MMP1P03956 469 aa19.36■□□□□ 0.69
USE1-208ENST00000600970 SMAD4Q13485 552 aaKnown RBP19.36■□□□□ 0.69
USE1-208ENST00000600970 BTG3Q14201 252 aaPredicted RBP19.36■□□□□ 0.69
USE1-208ENST00000600970 CHD1LQ86WJ1 897 aa19.36■□□□□ 0.69
USE1-208ENST00000600970 SENP7Q9BQF6 1050 aa19.36■□□□□ 0.69
USE1-208ENST00000600970 SENP2Q9HC62 589 aa19.36■□□□□ 0.69
USE1-208ENST00000600970 TTC3P53804 2025 aa19.35■□□□□ 0.69
USE1-208ENST00000600970 STXBP3O00186 592 aa19.35■□□□□ 0.69
USE1-208ENST00000600970 DGKIO75912 1065 aa19.35■□□□□ 0.69
USE1-208ENST00000600970 ADAM15Q13444 863 aa19.35■□□□□ 0.69
USE1-208ENST00000600970 CAMK1Q14012 370 aa19.35■□□□□ 0.69
USE1-208ENST00000600970 TAF2Q6P1X5 1199 aa19.35■□□□□ 0.69
USE1-208ENST00000600970 ALG13Q9NP73 1137 aaKnown RBP19.35■□□□□ 0.69
USE1-208ENST00000600970 CD207Q9UJ71 328 aa19.35■□□□□ 0.69
USE1-208ENST00000600970 TCF7P36402 384 aaPredicted RBP19.34■□□□□ 0.69
USE1-208ENST00000600970 TROAPQ12815 778 aa19.34■□□□□ 0.69
USE1-208ENST00000600970 FBXO47Q5MNV8 452 aa19.34■□□□□ 0.69
USE1-208ENST00000600970 PCNX4Q63HM2 1172 aa19.34■□□□□ 0.69
USE1-208ENST00000600970 PIBF1Q8WXW3 757 aa19.34■□□□□ 0.69
USE1-208ENST00000600970 EDAQ92838 391 aa19.34■□□□□ 0.69
USE1-208ENST00000600970 PLVAPQ9BX97 442 aa19.34■□□□□ 0.69
USE1-208ENST00000600970 PLAGL2Q9UPG8 496 aa19.34■□□□□ 0.69
USE1-208ENST00000600970 ZNF318Q5VUA4 2279 aa19.34■□□□□ 0.69
USE1-208ENST00000600970 IFIT3O14879 490 aaKnown RBP19.33■□□□□ 0.68
USE1-208ENST00000600970 NUCB1Q02818 461 aa19.33■□□□□ 0.68
USE1-208ENST00000600970 TRDNQ13061 729 aa19.33■□□□□ 0.68
USE1-208ENST00000600970 RSPH3Q86UC2 560 aa19.33■□□□□ 0.68
USE1-208ENST00000600970 DNAJB3Q8WWF6 145 aa19.33■□□□□ 0.68
USE1-208ENST00000600970 P2RX5Q93086 422 aa19.33■□□□□ 0.68
USE1-208ENST00000600970 MSLNLQ96KJ4 702 aa19.33■□□□□ 0.68
USE1-208ENST00000600970 CDY2AQ9Y6F7 541 aa19.33■□□□□ 0.68
USE1-208ENST00000600970 ATP9AO75110 1047 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 EYA4O95677 639 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 DNAJB1P25685 340 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 NDUFV1P49821 464 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 PPFIA1Q13136 1202 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 GRIK4Q16099 956 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 MARCH8Q5T0T0 291 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 XRRA1Q6P2D8 792 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 USP17L6PQ6QN14 398 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 TSHZ1Q6ZSZ6 1077 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 BMP8AQ7Z5Y6 402 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 NLRX1Q86UT6 975 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 GIMAP8Q8ND71 665 aaPredicted RBP19.32■□□□□ 0.68
USE1-208ENST00000600970 SMARCC2Q8TAQ2 1214 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 LINC01599Q8WXQ3 324 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 PHOX2BQ99453 314 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 RWDD1Q9H446 243 aaPredicted RBP19.32■□□□□ 0.68
USE1-208ENST00000600970 TUBE1Q9UJT0 475 aa19.32■□□□□ 0.68
USE1-208ENST00000600970 MRPL42Q9Y6G3 142 aaKnown RBP19.32■□□□□ 0.68
USE1-208ENST00000600970 LOXHD1Q8IVV2 1947 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms