RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	PHF7	Q9BWX1	381 aa	Predicted RBP	12.9	□□□□□ -0.34
NUP62-222	ENST00000600935	EHMT1	Q9H9B1	1298 aa		12.9	□□□□□ -0.34
NUP62-222	ENST00000600935	SETD4	Q9NVD3	440 aa		12.9	□□□□□ -0.34
NUP62-222	ENST00000600935	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.9	□□□□□ -0.34
NUP62-222	ENST00000600935	PCDHGC5	Q9Y5F6	944 aa		12.9	□□□□□ -0.34
NUP62-222	ENST00000600935	MRPL42	Q9Y6G3	142 aa	Known RBP	12.9	□□□□□ -0.34
NUP62-222	ENST00000600935	ENPP3	O14638	875 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	DGKI	O75912	1065 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	HSPD1	P10809	573 aa	Known RBP	12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	GHR	P10912	638 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	ICAM3	P32942	547 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	RBM10	P98175	930 aa	Known RBP	12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	BTG3	Q14201	252 aa	Predicted RBP	12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	STOX1	Q6ZVD7	989 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	VSIG10L	Q86VR7	867 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	TBC1D10C	Q8IV04	446 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	VN1R2	Q8NFZ6	395 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	IRF2BPL	Q9H1B7	796 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	JMJD4	Q9H9V9	463 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	MRPL11	Q9Y3B7	192 aa	Known RBP	12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	TELO2	Q9Y4R8	837 aa		12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.89	□□□□□ -0.35
NUP62-222	ENST00000600935	NCOR2	Q9Y618	2525 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	GALR2	O43603	387 aa	Predicted RBP	12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	CFB	P00751	764 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	MYCL	P12524	364 aa	Predicted RBP	12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	NBL1	P41271	181 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	NRIP1	P48552	1158 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	HAND2	P61296	217 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	MGAT3	Q09327	533 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	LPIN1	Q14693	890 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	PGM5	Q15124	567 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	PTPN21	Q16825	1174 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	C20orf194	Q5TEA3	1177 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	KCNV1	Q6PIU1	500 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	RUFY4	Q6ZNE9	571 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	ERMP1	Q7Z2K6	904 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	TRIM50	Q86XT4	487 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	LMBR1	Q8WVP7	490 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	ZFP91	Q96JP5	570 aa	Predicted RBP	12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	RPGRIP1	Q96KN7	1286 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	ZKSCAN3	Q9BRR0	538 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	EP300	Q09472	2414 aa	Predicted RBP	12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	ZMYM6	O95789	1325 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	NEDD4	P46934	1319 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	SALL3	Q9BXA9	1300 aa		12.88	□□□□□ -0.35
NUP62-222	ENST00000600935	CACNA1B	Q00975	2339 aa		12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	PPP1R11	O60927	126 aa	Predicted RBP	12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	TGFB3	P10600	412 aa		12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	ATF7	P17544	494 aa	Predicted RBP	12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	NUBP1	P53384	320 aa		12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	RBM23	Q86U06	439 aa	Known RBP	12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	KLHL23	Q8NBE8	558 aa		12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	ATP8B4	Q8TF62	1192 aa		12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	POF1B	Q8WVV4	589 aa		12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	TRPC6	Q9Y210	931 aa		12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	KAT6A	Q92794	2004 aa		12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	CCDC171	Q6TFL3	1326 aa		12.87	□□□□□ -0.35
NUP62-222	ENST00000600935	LAMA4	Q16363	1823 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	MYO10	Q9HD67	2058 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935		A0A0D9SFI3	127 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	HOXA13	P31271	388 aa	Predicted RBP	12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	SEMA3F	Q13275	785 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	NAALADL2	Q58DX5	795 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	DGKH	Q86XP1	1220 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	MIER1	Q8N108	512 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	PNMA1	Q8ND90	353 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	PPP2R3C	Q969Q6	453 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	FAM227B	Q96M60	508 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	RIPOR3	Q96MK2	946 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	GPR20	Q99678	358 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	USP26	Q9BXU7	913 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	CHMP4B	Q9H444	224 aa	Known RBP	12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	MLXIP	Q9HAP2	919 aa		12.86	□□□□□ -0.35
NUP62-222	ENST00000600935	CFAP47	Q6ZTR5	3102 aa		12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	GNAT1	P11488	350 aa		12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	ARHGAP4	P98171	946 aa		12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	FBXO47	Q5MNV8	452 aa		12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	CMTR2	Q8IYT2	770 aa	Known RBP	12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	TMEM105	Q8N8V8	129 aa		12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	MTMR8	Q96EF0	704 aa		12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	S1PR5	Q9H228	398 aa		12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	AGO3	Q9H9G7	860 aa	Known RBP	12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	HELLS	Q9NRZ9	838 aa		12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	LOXHD1	Q8IVV2	1947 aa		12.85	□□□□□ -0.35
NUP62-222	ENST00000600935	PER2	O15055	1255 aa		12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	KDM4A	O75164	1064 aa		12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	PC	P11498	1178 aa	Known RBP	12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	GATM	P50440	423 aa		12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	MRPS9	P82933	396 aa	Known RBP	12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	KCNC3	Q14003	757 aa		12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	ASPRV1	Q53RT3	343 aa		12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	METTL7B	Q6UX53	244 aa		12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	MFSD6	Q6ZSS7	791 aa		12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	CYFIP1	Q7L576	1253 aa		12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	VAT1L	Q9HCJ6	419 aa		12.84	□□□□□ -0.35
NUP62-222	ENST00000600935	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms