RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 GTPBP4Q9BZE4 634 aaKnown RBP16.88■□□□□ 0.29
HIF3A-218ENST00000600383 ASCC2Q9H1I8 757 aaPredicted RBP16.88■□□□□ 0.29
HIF3A-218ENST00000600383 RRAGCQ9HB90 399 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 TUFT1Q9NNX1 390 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 KCNJ18B7U540 433 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 TEX33O43247 280 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 ATP9AO75110 1047 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 CCNE1P24864 410 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 CCND2P30279 289 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 PSMD2Q13200 908 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 KCNJ12Q14500 433 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 NR1I3Q14994 352 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 NIPA1Q7RTP0 329 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 MIER3Q7Z3K6 550 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 VSIG10LQ86VR7 867 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 NCAPG2Q86XI2 1143 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 CTAGE1Q96RT6 745 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 VPS16Q9H269 839 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 BICDL2A1A5D9 508 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 DHX15O43143 795 aaKnown RBP16.87■□□□□ 0.29
HIF3A-218ENST00000600383 GSDMDP57764 484 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 KRT31Q15323 416 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 EPHA7Q15375 998 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 FILIP1LQ4L180 1135 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 TCP11X2Q5H9J9 407 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 TTI2Q6NXR4 508 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 TRMT1LQ7Z2T5 733 aaKnown RBP16.87■□□□□ 0.29
HIF3A-218ENST00000600383 ANKRD20A12PQ8NF67 263 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 WRAP73Q9P2S5 460 aaPredicted RBP16.87■□□□□ 0.29
HIF3A-218ENST00000600383 SCN4AP35499 1836 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 FRMPD4Q14CM0 1322 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 A0A1B0GTH6 734 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 N4BP3O15049 544 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 ZNF500O60304 480 aaPredicted RBP16.87■□□□□ 0.29
HIF3A-218ENST00000600383 EYA4O95677 639 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 PPP1R2P41236 205 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 HERVK_113P62684 666 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 GIT2Q14161 759 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 FAM26FQ5R3K3 315 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 APTXQ7Z2E3 356 aaKnown RBP16.87■□□□□ 0.29
HIF3A-218ENST00000600383 LXNQ9BS40 222 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 SEMA6BQ9H3T3 888 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 TBC1D22BQ9NU19 505 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 AGTPBP1Q9UPW5 1226 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 KCNH4Q9UQ05 1017 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 PTPRFP10586 1907 aa16.87■□□□□ 0.29
HIF3A-218ENST00000600383 PES1O00541 588 aaKnown RBP16.86■□□□□ 0.29
HIF3A-218ENST00000600383 EHHADHQ08426 723 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 MKRN3Q13064 507 aaKnown RBP16.86■□□□□ 0.29
HIF3A-218ENST00000600383 B3GNT9Q6UX72 402 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 IRF2BP1Q8IU81 584 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 MB21D1Q8N884 522 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 CHST13Q8NET6 341 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 DUSP9Q99956 384 aaKnown RBP16.86■□□□□ 0.29
HIF3A-218ENST00000600383 REEP2Q9BRK0 252 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 RUSC1Q9BVN2 902 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 SPATC1LQ9H0A9 340 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 TAB2Q9NYJ8 693 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 ADD3Q9UEY8 706 aaKnown RBP16.86■□□□□ 0.29
HIF3A-218ENST00000600383 TCEAL9Q9UHQ7 104 aa16.86■□□□□ 0.29
HIF3A-218ENST00000600383 SFI1A8K8P3 1242 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 SKILP12757 684 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 SFPQP23246 707 aaKnown RBP eCLIP16.85■□□□□ 0.29
HIF3A-218ENST00000600383 CNTN2Q02246 1040 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 SPAG1Q07617 926 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 GOLGA8FQ08AF8 430 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 GOLGA8DPQ0D2H9 430 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 LDLRAD1Q5T700 205 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 ARMCX5Q6P1M9 558 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 FASTKD5Q7L8L6 764 aaKnown RBP16.85■□□□□ 0.29
HIF3A-218ENST00000600383 NACC1Q96RE7 527 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 FGFBP2Q9BYJ0 223 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 MAGEC2Q9UBF1 373 aaPredicted RBP16.85■□□□□ 0.29
HIF3A-218ENST00000600383 GJA5P36382 358 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 SPECC1LQ69YQ0 1117 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 MYOCDQ8IZQ8 938 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 GUF1Q8N442 669 aaKnown RBP16.85■□□□□ 0.29
HIF3A-218ENST00000600383 KIAA1524Q8TCG1 905 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 THAP9Q9H5L6 903 aa16.85■□□□□ 0.29
HIF3A-218ENST00000600383 LIMA1Q9UHB6 759 aaKnown RBP16.85■□□□□ 0.29
HIF3A-218ENST00000600383 RSPH10B2B2RC85 870 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 RSPH10BP0C881 870 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 COPB1P53618 953 aaKnown RBP16.84■□□□□ 0.29
HIF3A-218ENST00000600383 NOLC1Q14978 699 aaKnown RBP eCLIP16.84■□□□□ 0.29
HIF3A-218ENST00000600383 COBLL1Q53SF7 1204 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 CENPPQ6IPU0 288 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 RINT1Q6NUQ1 792 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 XRRA1Q6P2D8 792 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 NLRX1Q86UT6 975 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 RIOX2Q8IUF8 465 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 NELFCDQ8IXH7 590 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 LRRC10BA6NIK2 292 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 SORBS3O60504 671 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 P4HBP07237 508 aaKnown RBP16.84■□□□□ 0.29
HIF3A-218ENST00000600383 SNAPC2Q13487 334 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 R3HDMLQ9H3Y0 253 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 BCAS3Q9H6U6 928 aa16.84■□□□□ 0.29
HIF3A-218ENST00000600383 PAPPA2Q9BXP8 1791 aa16.83■□□□□ 0.29
HIF3A-218ENST00000600383 RGS20O76081 388 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms