RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 BAG4O95429 457 aaKnown RBP21.85■■□□□ 1.09
UPF1-209ENST00000600310 F2P00734 622 aa21.85■■□□□ 1.09
UPF1-209ENST00000600310 LGALS2P05162 132 aa21.85■■□□□ 1.09
UPF1-209ENST00000600310 NBR1Q14596 966 aa21.85■■□□□ 1.09
UPF1-209ENST00000600310 B3GNT9Q6UX72 402 aa21.85■■□□□ 1.09
UPF1-209ENST00000600310 MTMR9Q96QG7 549 aa21.85■■□□□ 1.09
UPF1-209ENST00000600310 TMEM60Q9H2L4 133 aa21.85■■□□□ 1.09
UPF1-209ENST00000600310 ZSCAN16Q9H4T2 348 aaPredicted RBP21.85■■□□□ 1.09
UPF1-209ENST00000600310 PCDHB6Q9Y5E3 794 aa21.85■■□□□ 1.09
UPF1-209ENST00000600310 A0A0U1RQG5 324 aaPredicted RBP21.84■■□□□ 1.09
UPF1-209ENST00000600310 MARCH6O60337 910 aa21.84■■□□□ 1.09
UPF1-209ENST00000600310 LGR5O75473 907 aa21.84■■□□□ 1.09
UPF1-209ENST00000600310 ZNF286BP0CG31 522 aa21.84■■□□□ 1.09
UPF1-209ENST00000600310 ANP32AP39687 249 aaKnown RBP21.84■■□□□ 1.09
UPF1-209ENST00000600310 PSMC6P62333 389 aa21.84■■□□□ 1.09
UPF1-209ENST00000600310 SNX17Q15036 470 aa21.84■■□□□ 1.09
UPF1-209ENST00000600310 C1orf53Q5VUE5 145 aa21.84■■□□□ 1.09
UPF1-209ENST00000600310 ABHD15Q6UXT9 468 aa21.84■■□□□ 1.09
UPF1-209ENST00000600310 SMAP1Q8IYB5 467 aaPredicted RBP21.84■■□□□ 1.09
UPF1-209ENST00000600310 KATNAL1Q9BW62 490 aa21.84■■□□□ 1.09
UPF1-209ENST00000600310 UNC45AQ9H3U1 944 aa21.84■■□□□ 1.09
UPF1-209ENST00000600310 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.84■■□□□ 1.09
UPF1-209ENST00000600310 GRIN2DO15399 1336 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 IGKV6D-21A0A0A0MT36 114 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 HAS3O00219 553 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 SUPT20HL2P0C7V6 817 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 ATN1P54259 1190 aaPredicted RBP21.83■■□□□ 1.09
UPF1-209ENST00000600310 PPP2R5CQ13362 524 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 ITGA7Q13683 1181 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 UTP14CQ5TAP6 766 aaKnown RBP21.83■■□□□ 1.09
UPF1-209ENST00000600310 MIS18BP1Q6P0N0 1132 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 C4orf32Q8N8J7 132 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 SLC43A3Q8NBI5 491 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 RDM1Q8NG50 284 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 PCYT2Q99447 389 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 HTATIP2Q9BUP3 242 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 SEZ6LQ9BYH1 1024 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 VAV3Q9UKW4 847 aa21.83■■□□□ 1.09
UPF1-209ENST00000600310 EMSYQ7Z589 1322 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 WDR64B1ANS9 1081 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 H3BRB1 525 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 ARVCFO00192 962 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 OR52Z1P0C646 297 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 ZSCAN22P10073 491 aaPredicted RBP21.82■■□□□ 1.08
UPF1-209ENST00000600310 SFNP31947 248 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 PSEN2P49810 448 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 CDK7P50613 346 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 LRRC26Q2I0M4 334 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 TRIM50Q86XT4 487 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 SMARCAD1Q9H4L7 1026 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 TUT1Q9H6E5 874 aaKnown RBP21.82■■□□□ 1.08
UPF1-209ENST00000600310 PCDHA12Q9UN75 941 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 PCDHA10Q9Y5I2 948 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 BRCA2P51587 3418 aa21.82■■□□□ 1.08
UPF1-209ENST00000600310 MKI67P46013 3256 aaKnown RBP21.82■■□□□ 1.08
UPF1-209ENST00000600310 DOCK5Q9H7D0 1870 aa21.81■■□□□ 1.08
UPF1-209ENST00000600310 PSAPP07602 524 aa21.81■■□□□ 1.08
UPF1-209ENST00000600310 JAK3P52333 1124 aa21.81■■□□□ 1.08
UPF1-209ENST00000600310 PKP1Q13835 747 aa21.81■■□□□ 1.08
UPF1-209ENST00000600310 MFSD10Q14728 455 aa21.81■■□□□ 1.08
UPF1-209ENST00000600310 NBPF20Q3BBV1 942 aa21.81■■□□□ 1.08
UPF1-209ENST00000600310 AZI2Q9H6S1 392 aa21.81■■□□□ 1.08
UPF1-209ENST00000600310 TTC12Q9H892 705 aaPredicted RBP21.81■■□□□ 1.08
UPF1-209ENST00000600310 DISC1Q9NRI5 854 aa21.81■■□□□ 1.08
UPF1-209ENST00000600310 ZNF215Q9UL58 517 aaPredicted RBP21.81■■□□□ 1.08
UPF1-209ENST00000600310 LAD1O00515 517 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 CHMP2AO43633 222 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 TXKP42681 527 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 STAT5BP51692 787 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 SPIRE1Q08AE8 756 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 PTGDRQ13258 359 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 KIAA0753Q2KHM9 967 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 NFRKBQ6P4R8 1299 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 PLPPR4Q7Z2D5 763 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 MIER3Q7Z3K6 550 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 AFAP1L1Q8TED9 768 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 GLG1Q92896 1179 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 ERAP1Q9NZ08 941 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 SAMM50Q9Y512 469 aa21.8■■□□□ 1.08
UPF1-209ENST00000600310 EML1O00423 815 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 BACH1O14867 736 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 F13A1P00488 732 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 RTP1P59025 263 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 PTPN11Q06124 597 aaPredicted RBP21.79■■□□□ 1.08
UPF1-209ENST00000600310 TRIM60Q495X7 471 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 FAM160B1Q5W0V3 765 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 SWSAP1Q6NVH7 229 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 FAM173BQ6P4H8 233 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 ANKRD33Q7Z3H0 272 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 SESTD1Q86VW0 696 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 CCDC60Q8IWA6 550 aaPredicted RBP21.79■■□□□ 1.08
UPF1-209ENST00000600310 ZNF302Q9NR11 478 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 TSHZ2Q9NRE2 1034 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 SCN10AQ9Y5Y9 1956 aa21.79■■□□□ 1.08
UPF1-209ENST00000600310 BMP15O95972 392 aa21.78■■□□□ 1.08
UPF1-209ENST00000600310 SLC26A2P50443 739 aa21.78■■□□□ 1.08
UPF1-209ENST00000600310 CHMP4BP1P59074 171 aa21.78■■□□□ 1.08
UPF1-209ENST00000600310 ATP2C1P98194 919 aaPredicted RBP21.78■■□□□ 1.08
UPF1-209ENST00000600310 FOXD4L5Q5VV16 416 aaPredicted RBP21.78■■□□□ 1.08
UPF1-209ENST00000600310 FOXD4L4Q8WXT5 416 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms