RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 FDPSP14324 419 aaKnown RBP18.42■□□□□ 0.54
LSM4-206ENST00000600289 RAG1P15918 1043 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 ITGB8P26012 769 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 PSEN2P49810 448 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 EPHB4P54760 987 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 SETQ01105 290 aaPredicted RBP18.42■□□□□ 0.54
LSM4-206ENST00000600289 ST3GAL1Q11201 340 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 BLIDQ8IZY5 108 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 CYP2W1Q8TAV3 490 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 ZSCAN31Q96LW9 406 aaPredicted RBP18.42■□□□□ 0.54
LSM4-206ENST00000600289 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 NECAB3Q96P71 396 aaPredicted RBP18.42■□□□□ 0.54
LSM4-206ENST00000600289 TRPV6Q9H1D0 765 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 AGO4Q9HCK5 861 aaKnown RBP18.42■□□□□ 0.54
LSM4-206ENST00000600289 SH2B1Q9NRF2 756 aaPredicted RBP18.42■□□□□ 0.54
LSM4-206ENST00000600289 ORC3Q9UBD5 711 aaPredicted RBP18.42■□□□□ 0.54
LSM4-206ENST00000600289 KAT6AQ92794 2004 aa18.42■□□□□ 0.54
LSM4-206ENST00000600289 MUC6Q6W4X9 2439 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 FAM86B1E9PN63 330 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 LGALS2P05162 132 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 FAM86B2P0C5J1 330 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 USP11P51784 963 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 MRPS5P82675 430 aaKnown RBP18.41■□□□□ 0.54
LSM4-206ENST00000600289 MFSD10Q14728 455 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 MFSD5Q6N075 450 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 RASGRP4Q8TDF6 673 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 PPM1EQ8WY54 764 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 RNPC3Q96LT9 517 aaKnown RBP18.41■□□□□ 0.54
LSM4-206ENST00000600289 LLPHQ9BRT6 129 aaKnown RBP18.41■□□□□ 0.54
LSM4-206ENST00000600289 ZNF576Q9H609 170 aa18.41■□□□□ 0.54
LSM4-206ENST00000600289 SORBS3O60504 671 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 ARP10275 920 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 HOXC8P31273 242 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 ZNF76P36508 570 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 KIAA0753Q2KHM9 967 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 FAM47CQ5HY64 1035 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 LRFN3Q9BTN0 628 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 NOC4LQ9BVI4 516 aaKnown RBP18.4■□□□□ 0.54
LSM4-206ENST00000600289 JPH1Q9HDC5 661 aaPredicted RBP18.4■□□□□ 0.54
LSM4-206ENST00000600289 TRMT13Q9NUP7 481 aaKnown RBP18.4■□□□□ 0.54
LSM4-206ENST00000600289 GTF2IRD1Q9UHL9 959 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 HCN4Q9Y3Q4 1203 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 EMSYQ7Z589 1322 aa18.4■□□□□ 0.54
LSM4-206ENST00000600289 MYH9P35579 1960 aaKnown RBP18.39■□□□□ 0.53
LSM4-206ENST00000600289 SCN5AQ14524 2016 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 GSTTP1A0A1W2PQM5 241 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 H3BRB1 525 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 ITGB3BPQ13352 177 aaPredicted RBP18.39■□□□□ 0.53
LSM4-206ENST00000600289 MOXD1Q6UVY6 613 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 PLA2G4DQ86XP0 818 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 C7orf31Q8N865 590 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 SEPT1Q8WYJ6 367 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 SNX27Q96L92 541 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 SDF4Q9BRK5 362 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 ALG1Q9BT22 464 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 BACH2Q9BYV9 841 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 HIPK3Q9H422 1215 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 TUT1Q9H6E5 874 aaKnown RBP18.39■□□□□ 0.53
LSM4-206ENST00000600289 SLC9A2Q9UBY0 812 aa18.39■□□□□ 0.53
LSM4-206ENST00000600289 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
LSM4-206ENST00000600289 PITPNM1O00562 1244 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 EDIL3O43854 480 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 ST18O60284 1047 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 TCF7P36402 384 aaPredicted RBP18.38■□□□□ 0.53
LSM4-206ENST00000600289 FPGSQ05932 587 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 RBL2Q08999 1139 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 KRT25Q7Z3Z0 450 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 LENG9Q96B70 501 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 CTAGE1Q96RT6 745 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 HDAC6Q9UBN7 1215 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 KCNJ14Q9UNX9 436 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 TELO2Q9Y4R8 837 aa18.38■□□□□ 0.53
LSM4-206ENST00000600289 CYP3A7-CYP3A51PA0A087WV96 503 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 DHX15O43143 795 aaKnown RBP18.37■□□□□ 0.53
LSM4-206ENST00000600289 JAK2O60674 1132 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 LGR5O75473 907 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 CYP3A7P24462 503 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 NONOQ15233 471 aaKnown RBP eCLIP18.37■□□□□ 0.53
LSM4-206ENST00000600289 PTGISQ16647 500 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 GDF6Q6KF10 455 aaPredicted RBP18.37■□□□□ 0.53
LSM4-206ENST00000600289 TMEM199Q8N511 208 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 TBCKQ8TEA7 893 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 MBOAT7Q96N66 472 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 TBC1D22BQ9NU19 505 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 PKD2L1Q9P0L9 805 aa18.37■□□□□ 0.53
LSM4-206ENST00000600289 IPO5O00410 1097 aaKnown RBP18.36■□□□□ 0.53
LSM4-206ENST00000600289 ATG7O95352 703 aa18.36■□□□□ 0.53
LSM4-206ENST00000600289 PPIGQ13427 754 aaKnown RBP eCLIP18.36■□□□□ 0.53
LSM4-206ENST00000600289 Q4G0T1 1027 aa18.36■□□□□ 0.53
LSM4-206ENST00000600289 CCDC83Q8IWF9 413 aa18.36■□□□□ 0.53
LSM4-206ENST00000600289 CCDC155Q8N6L0 562 aa18.36■□□□□ 0.53
LSM4-206ENST00000600289 CAGE1Q8TC20 777 aa18.36■□□□□ 0.53
LSM4-206ENST00000600289 PPP1R12CQ9BZL4 782 aa18.36■□□□□ 0.53
LSM4-206ENST00000600289 WNT8AQ9H1J5 351 aa18.36■□□□□ 0.53
LSM4-206ENST00000600289 SIP14410 1827 aa18.35■□□□□ 0.53
LSM4-206ENST00000600289 TRANK1O15050 2925 aa18.35■□□□□ 0.53
LSM4-206ENST00000600289 UMODL1Q5DID0 1318 aa18.35■□□□□ 0.53
LSM4-206ENST00000600289 IGKV6D-21A0A0A0MT36 114 aa18.35■□□□□ 0.53
LSM4-206ENST00000600289 MMP1P03956 469 aa18.35■□□□□ 0.53
LSM4-206ENST00000600289 CYP2C18P33260 490 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms