RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 GNAQP50148 359 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 ARHGAP4P98171 946 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 UTP14CQ5TAP6 766 aaKnown RBP24.37■■□□□ 1.49
PNKP-212ENST00000599454 USP17L6PQ6QN14 398 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 RPAINQ86UA6 219 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 TRIM50Q86XT4 487 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 ZNF654Q8IZM8 581 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 MAP4K1Q92918 833 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 CDHR1Q96JP9 859 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 IFIH1Q9BYX4 1025 aaKnown RBP24.37■■□□□ 1.49
PNKP-212ENST00000599454 PI4K2BG5E9Z4 385 aa24.36■■□□□ 1.49
PNKP-212ENST00000599454 MEIS2O14770 477 aa24.36■■□□□ 1.49
PNKP-212ENST00000599454 GPM6BQ13491 265 aa24.36■■□□□ 1.49
PNKP-212ENST00000599454 TAF2Q6P1X5 1199 aa24.36■■□□□ 1.49
PNKP-212ENST00000599454 FAM178BQ8IXR5 827 aa24.36■■□□□ 1.49
PNKP-212ENST00000599454 TMEM192Q8IY95 271 aa24.36■■□□□ 1.49
PNKP-212ENST00000599454 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.36■■□□□ 1.49
PNKP-212ENST00000599454 GPRASP2Q96D09 838 aa24.36■■□□□ 1.49
PNKP-212ENST00000599454 LY9Q9HBG7 655 aa24.36■■□□□ 1.49
PNKP-212ENST00000599454 LOXHD1Q8IVV2 1947 aa24.35■■□□□ 1.49
PNKP-212ENST00000599454 UPP2O95045 317 aa24.35■■□□□ 1.49
PNKP-212ENST00000599454 CASC1Q6TDU7 716 aa24.35■■□□□ 1.49
PNKP-212ENST00000599454 TMTC2Q8N394 836 aa24.35■■□□□ 1.49
PNKP-212ENST00000599454 YTHDC1Q96MU7 727 aaKnown RBP24.35■■□□□ 1.49
PNKP-212ENST00000599454 SP4Q02446 784 aa24.34■■□□□ 1.49
PNKP-212ENST00000599454 PTCRAQ6ISU1 281 aaPredicted RBP24.34■■□□□ 1.49
PNKP-212ENST00000599454 RSPH3Q86UC2 560 aa24.34■■□□□ 1.49
PNKP-212ENST00000599454 GJD3Q8N144 294 aa24.34■■□□□ 1.49
PNKP-212ENST00000599454 BANK1Q8NDB2 785 aa24.34■■□□□ 1.49
PNKP-212ENST00000599454 KHSRPQ92945 711 aaKnown RBP eCLIP24.34■■□□□ 1.49
PNKP-212ENST00000599454 OSBPL7Q9BZF2 842 aa24.34■■□□□ 1.49
PNKP-212ENST00000599454 TCF7P36402 384 aaPredicted RBP24.33■■□□□ 1.49
PNKP-212ENST00000599454 NEK9Q8TD19 979 aa24.33■■□□□ 1.49
PNKP-212ENST00000599454 IL17RAQ96F46 866 aa24.33■■□□□ 1.49
PNKP-212ENST00000599454 CD320Q9NPF0 282 aa24.33■■□□□ 1.49
PNKP-212ENST00000599454 ERAP1Q9NZ08 941 aa24.33■■□□□ 1.49
PNKP-212ENST00000599454 RWDD3Q9Y3V2 267 aa24.33■■□□□ 1.49
PNKP-212ENST00000599454 RBM8AQ9Y5S9 174 aaKnown RBP24.33■■□□□ 1.49
PNKP-212ENST00000599454 GRXCR2A6NFK2 248 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 RBAK-RBAKDNI3L0D1 243 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 CHRNA1P02708 482 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 RPLP2P05387 115 aaKnown RBP24.32■■□□□ 1.48
PNKP-212ENST00000599454 CALM1P0DP23 149 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 CALM2P0DP24 149 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 CALM3P0DP25 149 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 KCNA2P16389 499 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 SEPT1Q8WYJ6 367 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 PABPC5Q96DU9 382 aaKnown RBP24.32■■□□□ 1.48
PNKP-212ENST00000599454 TMEM87BQ96K49 555 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 MYL10Q9BUA6 226 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 NSUN3Q9H649 340 aaKnown RBP24.32■■□□□ 1.48
PNKP-212ENST00000599454 PSTPIP2Q9H939 334 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 EHMT1Q9H9B1 1298 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 FAM50BQ9Y247 325 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 TELO2Q9Y4R8 837 aa24.32■■□□□ 1.48
PNKP-212ENST00000599454 NCK2O43639 380 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 PRC1O43663 620 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 RB1P06400 928 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 IL9P15248 144 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 MCM5P33992 734 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 PPFIA1Q13136 1202 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 COL19A1Q14993 1142 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 NFXL1Q6ZNB6 911 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 FIBCD1Q8N539 461 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 C11orf16Q9NQ32 467 aa24.31■■□□□ 1.48
PNKP-212ENST00000599454 CCDC69A6NI79 296 aa24.3■■□□□ 1.48
PNKP-212ENST00000599454 C5orf67F2Z3F1 127 aa24.3■■□□□ 1.48
PNKP-212ENST00000599454 MAFGO15525 162 aa24.3■■□□□ 1.48
PNKP-212ENST00000599454 MGAT3Q09327 533 aa24.3■■□□□ 1.48
PNKP-212ENST00000599454 TCEAL5Q5H9L2 206 aa24.3■■□□□ 1.48
PNKP-212ENST00000599454 SRBD1Q8N5C6 995 aaKnown RBP24.3■■□□□ 1.48
PNKP-212ENST00000599454 LMAN2LQ9H0V9 348 aa24.3■■□□□ 1.48
PNKP-212ENST00000599454 SMARCAD1Q9H4L7 1026 aa24.3■■□□□ 1.48
PNKP-212ENST00000599454 TUBE1Q9UJT0 475 aa24.3■■□□□ 1.48
PNKP-212ENST00000599454 MUC6Q6W4X9 2439 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 GSTTP1A0A1W2PQM5 241 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 MBLAC1A4D2B0 266 aaPredicted RBP24.29■■□□□ 1.48
PNKP-212ENST00000599454 SH2B2O14492 632 aaPredicted RBP24.29■■□□□ 1.48
PNKP-212ENST00000599454 ATP9AO75110 1047 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 PLEKHA8P1O95397 391 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 GHRP10912 638 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 ITGB5P18084 799 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 SSTR3P32745 418 aaPredicted RBP24.29■■□□□ 1.48
PNKP-212ENST00000599454 LIFRP42702 1097 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 MTMR1Q13613 665 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 GRIK4Q16099 956 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 RUFY4Q6ZNE9 571 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 C11orf84Q9BUA3 381 aaPredicted RBP24.29■■□□□ 1.48
PNKP-212ENST00000599454 UBIAD1Q9Y5Z9 338 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 ADGRA3Q8IWK6 1321 aa24.29■■□□□ 1.48
PNKP-212ENST00000599454 SPDYE3A6NKU9 549 aa24.28■■□□□ 1.48
PNKP-212ENST00000599454 ALADP13716 330 aa24.28■■□□□ 1.48
PNKP-212ENST00000599454 CTNNB1P35222 781 aa24.28■■□□□ 1.48
PNKP-212ENST00000599454 LPIN1Q14693 890 aa24.28■■□□□ 1.48
PNKP-212ENST00000599454 GLG1Q92896 1179 aa24.28■■□□□ 1.48
PNKP-212ENST00000599454 KIAA1671Q9BY89 1806 aa24.27■■□□□ 1.48
PNKP-212ENST00000599454 BMPR1AP36894 532 aa24.27■■□□□ 1.48
PNKP-212ENST00000599454 TSHZ1Q6ZSZ6 1077 aa24.27■■□□□ 1.48
PNKP-212ENST00000599454 TNPO1Q92973 898 aaKnown RBP24.27■■□□□ 1.48
PNKP-212ENST00000599454 RC3H2Q9HBD1 1191 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms