RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 CMA1P23946 247 aa24.58■■□□□ 1.53
LTBP4-224ENST00000599016 CNGA1P29973 690 aa24.58■■□□□ 1.53
LTBP4-224ENST00000599016 UBA7P41226 1012 aa24.58■■□□□ 1.53
LTBP4-224ENST00000599016 TRIM32Q13049 653 aa24.58■■□□□ 1.53
LTBP4-224ENST00000599016 LAMC2Q13753 1193 aa24.58■■□□□ 1.53
LTBP4-224ENST00000599016 KRT79Q5XKE5 535 aa24.58■■□□□ 1.53
LTBP4-224ENST00000599016 SMAP1Q8IYB5 467 aaPredicted RBP24.58■■□□□ 1.53
LTBP4-224ENST00000599016 RDM1Q8NG50 284 aa24.58■■□□□ 1.53
LTBP4-224ENST00000599016 LMBRD1Q9NUN5 540 aa24.58■■□□□ 1.53
LTBP4-224ENST00000599016 SAMM50Q9Y512 469 aa24.58■■□□□ 1.53
LTBP4-224ENST00000599016 HTTP42858 3142 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 GADD45BO75293 160 aaPredicted RBP24.57■■□□□ 1.52
LTBP4-224ENST00000599016 INHAP05111 366 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 EN2P19622 333 aaPredicted RBP24.57■■□□□ 1.52
LTBP4-224ENST00000599016 EPHA7Q15375 998 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 SPECC1Q5M775 1068 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 RESP18Q5W5W9 173 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 HAUS3Q68CZ6 603 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 SHC4Q6S5L8 630 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 B3GNT9Q6UX72 402 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 TRPV1Q8NER1 839 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 MRPS27Q92552 414 aaKnown RBP24.57■■□□□ 1.52
LTBP4-224ENST00000599016 COPS5Q92905 334 aa24.57■■□□□ 1.52
LTBP4-224ENST00000599016 NOP56O00567 594 aaKnown RBP24.56■■□□□ 1.52
LTBP4-224ENST00000599016 SEPT4O43236 478 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 SP4Q02446 784 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 MAP3K21Q5TCX8 1036 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 CABP7Q86V35 215 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 FSIP1Q8NA03 581 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 OR6J1Q8NGC5 347 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 SNX29Q8TEQ0 813 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 SYMPKQ92797 1274 aaKnown RBP24.56■■□□□ 1.52
LTBP4-224ENST00000599016 SPATA33Q96N06 139 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 BCAS3Q9H6U6 928 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 DISC1Q9NRI5 854 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 Q9Y3F1 56 aa24.56■■□□□ 1.52
LTBP4-224ENST00000599016 WDR81Q562E7 1941 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 PP2D1A8MPX8 630 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 SLC26A4O43511 780 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 CCNE2O96020 404 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 PSAPP07602 524 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 ACTR2P61160 394 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 ARHGAP1Q07960 439 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 MIS18BP1Q6P0N0 1132 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 CCDC73Q6ZRK6 1079 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 RASSF8Q8NHQ8 419 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 NEK9Q8TD19 979 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 EMID1Q96A84 441 aaPredicted RBP24.55■■□□□ 1.52
LTBP4-224ENST00000599016 CALML4Q96GE6 196 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 EPSTI1Q96J88 318 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 CCSER1Q9C0I3 900 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 AP5M1Q9H0R1 490 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 CCDC39Q9UFE4 941 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 PCDHA10Q9Y5I2 948 aa24.55■■□□□ 1.52
LTBP4-224ENST00000599016 MYH9P35579 1960 aaKnown RBP24.54■■□□□ 1.52
LTBP4-224ENST00000599016 EML1O00423 815 aa24.54■■□□□ 1.52
LTBP4-224ENST00000599016 CDC25AP30304 524 aa24.54■■□□□ 1.52
LTBP4-224ENST00000599016 CCT6AP40227 531 aaKnown RBP24.54■■□□□ 1.52
LTBP4-224ENST00000599016 SLC9C1Q4G0N8 1177 aa24.54■■□□□ 1.52
LTBP4-224ENST00000599016 TMEM63BQ5T3F8 832 aa24.54■■□□□ 1.52
LTBP4-224ENST00000599016 GJC2Q5T442 439 aaPredicted RBP24.54■■□□□ 1.52
LTBP4-224ENST00000599016 SEPT1Q8WYJ6 367 aa24.54■■□□□ 1.52
LTBP4-224ENST00000599016 CDK5RAP3Q96JB5 506 aa24.54■■□□□ 1.52
LTBP4-224ENST00000599016 EIF2AK1Q9BQI3 630 aaKnown RBP24.54■■□□□ 1.52
LTBP4-224ENST00000599016 HMX1Q9NP08 348 aaPredicted RBP24.54■■□□□ 1.52
LTBP4-224ENST00000599016 GNEQ9Y223 722 aaKnown RBP24.54■■□□□ 1.52
LTBP4-224ENST00000599016 KDM3AQ9Y4C1 1321 aa24.54■■□□□ 1.52
LTBP4-224ENST00000599016 DYNC1LI2O43237 492 aaPredicted RBP24.53■■□□□ 1.52
LTBP4-224ENST00000599016 DUSP11O75319 330 aaKnown RBP24.53■■□□□ 1.52
LTBP4-224ENST00000599016 CCND3P30281 292 aaPredicted RBP24.53■■□□□ 1.52
LTBP4-224ENST00000599016 TLK2Q86UE8 772 aa24.53■■□□□ 1.52
LTBP4-224ENST00000599016 PYM1Q9BRP8 204 aaKnown RBP24.53■■□□□ 1.52
LTBP4-224ENST00000599016 POLR3CQ9BUI4 534 aaPredicted RBP24.53■■□□□ 1.52
LTBP4-224ENST00000599016 TUFT1Q9NNX1 390 aa24.53■■□□□ 1.52
LTBP4-224ENST00000599016 A0A1B0GVL5 298 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 ADCY6O43306 1168 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 P4HBP07237 508 aaKnown RBP24.52■■□□□ 1.52
LTBP4-224ENST00000599016 SUPT20HL2P0C7V6 817 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 RARBP10826 455 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 PFKFB1P16118 471 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 NFKBIBQ15653 356 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 ZRSR1Q15695 479 aaKnown RBP24.52■■□□□ 1.52
LTBP4-224ENST00000599016 BRDTQ58F21 947 aaPredicted RBP24.52■■□□□ 1.52
LTBP4-224ENST00000599016 ABHD15Q6UXT9 468 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 USP49Q70CQ1 688 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 PPTC7Q8NI37 304 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 SH3TC2Q8TF17 1288 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 GPR20Q99678 358 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 SPC25Q9HBM1 224 aa24.52■■□□□ 1.52
LTBP4-224ENST00000599016 FAM237AA0A1B0GTK4 181 aa24.51■■□□□ 1.51
LTBP4-224ENST00000599016 MSCO60682 206 aa24.51■■□□□ 1.51
LTBP4-224ENST00000599016 DKC1O60832 514 aaKnown RBP eCLIP24.51■■□□□ 1.51
LTBP4-224ENST00000599016 ATG7O95352 703 aa24.51■■□□□ 1.51
LTBP4-224ENST00000599016 MUTP22033 750 aa24.51■■□□□ 1.51
LTBP4-224ENST00000599016 RPA1P27694 616 aa24.51■■□□□ 1.51
LTBP4-224ENST00000599016 HSDL1Q3SXM5 330 aa24.51■■□□□ 1.51
LTBP4-224ENST00000599016 DYDC2Q96IM9 177 aa24.51■■□□□ 1.51
LTBP4-224ENST00000599016 MMTAG2Q9BU76 263 aaKnown RBP24.51■■□□□ 1.51
LTBP4-224ENST00000599016 NT5C3AQ9H0P0 336 aa24.51■■□□□ 1.51
LTBP4-224ENST00000599016 KCNH3Q9ULD8 1083 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms