RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 DDAH1O94760 285 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 PLA2G5P39877 138 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 GNAQP50148 359 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 LEXMQ3ZCV2 418 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 XRRA1Q6P2D8 792 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 TMEM192Q8IY95 271 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 LMBR1Q8WVP7 490 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 MAP4K1Q92918 833 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 MRPL38Q96DV4 380 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 LZTS2Q9BRK4 669 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 IFIH1Q9BYX4 1025 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 LY9Q9HBG7 655 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 RBM8AQ9Y5S9 174 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 KIAA1671Q9BY89 1806 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 WDR81Q562E7 1941 aa12.15□□□□□ -0.46
CHMP2A-202ENST00000596708 NRCAMQ92823 1304 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 H3BNC9 293 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 PIK3CDO00329 1044 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 PRC1O43663 620 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 PLEKHA8P1O95397 391 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 IL9P15248 144 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 SSTR3P32745 418 aaPredicted RBP12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 TCF7P36402 384 aaPredicted RBP12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 ADAM17P78536 824 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 TIGD5Q53EQ6 642 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 FAM26DQ5JW98 314 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 PTCRAQ6ISU1 281 aaPredicted RBP12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 TMTC2Q8N394 836 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 FIBCD1Q8N539 461 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 BANK1Q8NDB2 785 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 SEPT1Q8WYJ6 367 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 KHSRPQ92945 711 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 PSTPIP2Q9H939 334 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 CD320Q9NPF0 282 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 PKD2L1Q9P0L9 805 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 HCN4Q9Y3Q4 1203 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 XIRP2A4UGR9 3374 aa12.14□□□□□ -0.47
CHMP2A-202ENST00000596708 BDP1A6H8Y1 2624 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 FAM86C2PA6NEL3 165 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 ATP9AO75110 1047 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 CHRNA1P02708 482 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 GHRP10912 638 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 RXRAP19793 462 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 MARK3P27448 753 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 MCM5P33992 734 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 PPFIA1Q13136 1202 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 TCEAL5Q5H9L2 206 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 TAF2Q6P1X5 1199 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 RUFY4Q6ZNE9 571 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 RSPH3Q86UC2 560 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 GJD3Q8N144 294 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 CMTR1Q8N1G2 835 aaKnown RBP12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 CCDC82Q8N4S0 544 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 GLG1Q92896 1179 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 GPRASP2Q96D09 838 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 IL17RAQ96F46 866 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 TMEM87BQ96K49 555 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 MTA3Q9BTC8 594 aa12.13□□□□□ -0.47
CHMP2A-202ENST00000596708 GSTTP1A0A1W2PQM5 241 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 hCG_1642624A0A1W2PR95 340 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 SPDYE3A6NKU9 549 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 PI4K2BG5E9Z4 385 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 H3BQ06 376 aaPredicted RBP12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 SH2B2O14492 632 aaPredicted RBP12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 GPR37L1O60883 481 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 CALM1P0DP23 149 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 CALM2P0DP24 149 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 CALM3P0DP25 149 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 KCNA2P16389 499 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 CTNNB1P35222 781 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 IGBP1P78318 339 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 IRX6P78412 446 aaPredicted RBP12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 GRIK4Q16099 956 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 UBE2SQ16763 222 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 PUS10Q3MIT2 529 aaKnown RBP12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 RAB11FIP4Q86YS3 637 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 DNAJB3Q8WWF6 145 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 SMARCAD1Q9H4L7 1026 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 NSUN3Q9H649 340 aaKnown RBP12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 ERAP1Q9NZ08 941 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
CHMP2A-202ENST00000596708 FNDC1Q4ZHG4 1894 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 GRXCR2A6NFK2 248 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 ENPP3O14638 875 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 ITGB5P18084 799 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 MTMR1Q13613 665 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 LPIN1Q14693 890 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 RPAINQ86UA6 219 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 NEK9Q8TD19 979 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 PABPC5Q96DU9 382 aaKnown RBP12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 LRRC2Q9BYS8 371 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 CLDND1Q9NY35 253 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 TUBE1Q9UJT0 475 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms