RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 GRM6O15303 877 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 RB1P06400 928 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 GHRP10912 638 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
LIG1-209ENST00000596104 CTNNB1P35222 781 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 BMPR1AP36894 532 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 PTH1RQ03431 593 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 MGAT3Q09327 533 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 TRDNQ13061 729 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 UTP14CQ5TAP6 766 aaKnown RBP11.51□□□□□ -0.57
LIG1-209ENST00000596104 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 XRRA1Q6P2D8 792 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 RUFY4Q6ZNE9 571 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 FIBCD1Q8N539 461 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 CLP1Q92989 425 aaKnown RBP11.51□□□□□ -0.57
LIG1-209ENST00000596104 LMAN2LQ9H0V9 348 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 CLDND1Q9NY35 253 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 MICAL3Q7RTP6 2002 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 NRCAMQ92823 1304 aa11.51□□□□□ -0.57
LIG1-209ENST00000596104 PIK3CDO00329 1044 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 ANTXR2P58335 489 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 SP4Q02446 784 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 DLX2Q07687 328 aaPredicted RBP11.5□□□□□ -0.57
LIG1-209ENST00000596104 HYAL1Q12794 435 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 LPIN1Q14693 890 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 WTAPQ15007 396 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 TAF2Q6P1X5 1199 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 USP17L6PQ6QN14 398 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 EP400NLQ6ZTU2 488 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 ADHFE1Q8IWW8 467 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 PIBF1Q8WXW3 757 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 ZNF689Q96CS4 500 aaPredicted RBP11.5□□□□□ -0.57
LIG1-209ENST00000596104 C11orf84Q9BUA3 381 aaPredicted RBP11.5□□□□□ -0.57
LIG1-209ENST00000596104 FAM50BQ9Y247 325 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
LIG1-209ENST00000596104 ADGRA3Q8IWK6 1321 aa11.5□□□□□ -0.57
LIG1-209ENST00000596104 GSTTP1A0A1W2PQM5 241 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 ERICH2A1L162 156 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 MBLAC1A4D2B0 266 aaPredicted RBP11.49□□□□□ -0.57
LIG1-209ENST00000596104 E7EWF7 191 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 ENPP3O14638 875 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 NCK2O43639 380 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 ATP9AO75110 1047 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 KCNA2P16389 499 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 PDE4AP27815 886 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 IRS1P35568 1242 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 TCF7P36402 384 aaPredicted RBP11.49□□□□□ -0.57
LIG1-209ENST00000596104 CAMK1Q14012 370 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 SMAD2Q15796 467 aaKnown RBP11.49□□□□□ -0.57
LIG1-209ENST00000596104 MARCH8Q5T0T0 291 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 CATIPQ7Z7H3 387 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 RALYLQ86SE5 291 aaKnown RBP11.49□□□□□ -0.57
LIG1-209ENST00000596104 NLRX1Q86UT6 975 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
LIG1-209ENST00000596104 IGDCC4Q8TDY8 1250 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 UIMC1Q96RL1 719 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 MAP3K14Q99558 947 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 SPZ1Q9BXG8 430 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
LIG1-209ENST00000596104 MBTPS2O43462 519 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 TBX10O75333 385 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 MMP1P03956 469 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 ITGB5P18084 799 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 GTF2F1P35269 517 aaKnown RBP eCLIP11.48□□□□□ -0.57
LIG1-209ENST00000596104 PPFIA1Q13136 1202 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 SART3Q15020 963 aaKnown RBP11.48□□□□□ -0.57
LIG1-209ENST00000596104 GRIK4Q16099 956 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 FBXO47Q5MNV8 452 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 TTC22Q5TAA0 569 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 MB21D2Q8IYB1 491 aaPredicted RBP11.48□□□□□ -0.57
LIG1-209ENST00000596104 CRIPAKQ8N1N5 446 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 GIMAP8Q8ND71 665 aaPredicted RBP11.48□□□□□ -0.57
LIG1-209ENST00000596104 NCOA7Q8NI08 942 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 EXOC6Q8TAG9 804 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 SMARCC2Q8TAQ2 1214 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 LINC01599Q8WXQ3 324 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 SEPT1Q8WYJ6 367 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 GPRASP2Q96D09 838 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 AGO3Q9H9G7 860 aaKnown RBP11.48□□□□□ -0.57
LIG1-209ENST00000596104 TUBE1Q9UJT0 475 aa11.48□□□□□ -0.57
LIG1-209ENST00000596104 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 DGKIO75912 1065 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 CHMLP26374 656 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 MARK3P27448 753 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 NHLH1Q02575 133 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 SMAD4Q13485 552 aaKnown RBP11.47□□□□□ -0.57
LIG1-209ENST00000596104 BTG3Q14201 252 aaPredicted RBP11.47□□□□□ -0.57
LIG1-209ENST00000596104 CLUL1Q15846 466 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 TSHZ1Q6ZSZ6 1077 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 RSPH3Q86UC2 560 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 ZNF654Q8IZM8 581 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 DNAJB3Q8WWF6 145 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 CUL5Q93034 780 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 RRP36Q96EU6 259 aaKnown RBP11.47□□□□□ -0.57
LIG1-209ENST00000596104 FBXL18Q96ME1 805 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 PLVAPQ9BX97 442 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 KCNH6Q9H252 994 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms