RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 BLIDQ8IZY5 108 aa12.52□□□□□ -0.41
SHKBP1-206ENST00000595523 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-206ENST00000595523 WNT8BQ93098 351 aa12.52□□□□□ -0.41
SHKBP1-206ENST00000595523 LENG9Q96B70 501 aa12.52□□□□□ -0.41
SHKBP1-206ENST00000595523 PCYT2Q99447 389 aa12.52□□□□□ -0.41
SHKBP1-206ENST00000595523 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.41
SHKBP1-206ENST00000595523 JPH1Q9HDC5 661 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-206ENST00000595523 NFASCO94856 1347 aa12.52□□□□□ -0.41
SHKBP1-206ENST00000595523 MICAL3Q7RTP6 2002 aa12.52□□□□□ -0.41
SHKBP1-206ENST00000595523 TRANK1O15050 2925 aa12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 DHX15O43143 795 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 ZNF76P36508 570 aa12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 PPIGQ13427 754 aaKnown RBP eCLIP12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 UTP14CQ5TAP6 766 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 PLA2G4DQ86XP0 818 aa12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 TMEM199Q8N511 208 aa12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 C7orf31Q8N865 590 aa12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 SCLYQ96I15 445 aa12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 UIMC1Q96RL1 719 aa12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 ORC3Q9UBD5 711 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 SLC9A2Q9UBY0 812 aa12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 LIMCH1Q9UPQ0 1083 aa12.51□□□□□ -0.41
SHKBP1-206ENST00000595523 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 LGR5O75473 907 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 CCNE2O96020 404 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 SMIM10L2AP0DMW4 78 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 SMIM10L2BP0DMW5 78 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 ACRP10323 421 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 ACTR2P61160 394 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 RBL2Q08999 1139 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 TRIM71Q2Q1W2 868 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 TMEM240Q5SV17 173 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 GALNT17Q6IS24 598 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 TBCKQ8TEA7 893 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 SEPT1Q8WYJ6 367 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 RNPEPQ9H4A4 650 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 IL23AQ9NPF7 189 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 EMSYQ7Z589 1322 aa12.5□□□□□ -0.41
SHKBP1-206ENST00000595523 DDX39AO00148 427 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 ATG7O95352 703 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 SLC34A2O95436 690 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 TDP2O95551 362 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 ADAM17P78536 824 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 SETQ01105 290 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 GPNMBQ14956 572 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 PRR16Q569H4 304 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 RASIP1Q5U651 963 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 TRAF7Q6Q0C0 670 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 ZNF365Q70YC5 407 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 SERINC5Q86VE9 423 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 CCDC83Q8IWF9 413 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 SDF4Q9BRK5 362 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 SETD4Q9NVD3 440 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 ZNF215Q9UL58 517 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 NOD1Q9Y239 953 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
SHKBP1-206ENST00000595523 EYSQ5T1H1 3165 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 IGKV6D-21A0A0A0MT36 114 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 C17orf102A2RUQ5 167 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 FAM205CA6NFA0 338 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 IPO5O00410 1097 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 MSH4O15457 936 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 TREHO43280 583 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 CD2BP2O95400 341 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 IQCF3P0C7M6 154 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 USP11P51784 963 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 PTK7Q13308 1070 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 RABEP1Q15276 862 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 INF2Q27J81 1249 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 EARS2Q5JPH6 523 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 CAGE1Q8TC20 777 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 LMBR1Q8WVP7 490 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 TNFRSF25Q93038 417 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 RNPC3Q96LT9 517 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 MBOAT7Q96N66 472 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 TBC1D32Q96NH3 1257 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 ZNF577Q9BSK1 485 aa12.48□□□□□ -0.41
SHKBP1-206ENST00000595523 CYP3A7-CYP3A51PA0A087WV96 503 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 CKBP12277 381 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 CYP3A7P24462 503 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 MARK3P27448 753 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 NR5A1Q13285 461 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 BFSP2Q13515 415 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 MBTPS1Q14703 1052 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 NONOQ15233 471 aaKnown RBP eCLIP12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 FAM109BQ6ICB4 259 aaPredicted RBP12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 PSRC1Q6PGN9 363 aaPredicted RBP12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 ABHD15Q6UXT9 468 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 KRT25Q7Z3Z0 450 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 CCDC60Q8IWA6 550 aaPredicted RBP12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 AFAP1L1Q8TED9 768 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 WASF1Q92558 559 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 GLG1Q92896 1179 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 ATP6V0A1Q93050 837 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 GJA10Q969M2 543 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 SMARCAD1Q9H4L7 1026 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 ERAP1Q9NZ08 941 aa12.47□□□□□ -0.41
SHKBP1-206ENST00000595523 CXXC1Q9P0U4 656 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms