RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CD248Q9HCU0 757 aa16.98■□□□□ 0.31
PNKP-204ENST00000594661 COBLO75128 1261 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 HOXA13P31271 388 aaPredicted RBP16.97■□□□□ 0.31
PNKP-204ENST00000594661 TMEM266Q2M3C6 531 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 CDKAL1Q5VV42 579 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 ARHGAP27Q6ZUM4 889 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 SPATS2Q86XZ4 545 aaKnown RBP16.97■□□□□ 0.31
PNKP-204ENST00000594661 TRPM4Q8TD43 1214 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 TATDN2Q93075 761 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 CALR3Q96L12 384 aaKnown RBP16.97■□□□□ 0.31
PNKP-204ENST00000594661 RANBP17Q9H2T7 1088 aaKnown RBP16.97■□□□□ 0.31
PNKP-204ENST00000594661 TTC19Q6DKK2 380 aaPredicted RBP16.97■□□□□ 0.31
PNKP-204ENST00000594661 APTXQ7Z2E3 356 aaKnown RBP16.97■□□□□ 0.31
PNKP-204ENST00000594661 CHURC1Q8WUH1 139 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 ITFG2Q969R8 447 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 UIMC1Q96RL1 719 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 SLC24A3Q9HC58 644 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 HPCAL4Q9UM19 191 aa16.97■□□□□ 0.31
PNKP-204ENST00000594661 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 MYO1FO00160 1098 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 USP11P51784 963 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 ARHGAP4P98171 946 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 PAK1Q13153 545 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 GRB10Q13322 594 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 DGKZQ13574 1117 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 ANGEL2Q5VTE6 544 aaKnown RBP16.96■□□□□ 0.31
PNKP-204ENST00000594661 HOMEZQ8IX15 550 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 CTAGE1Q96RT6 745 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 CUEDC2Q9H467 287 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 RWDD2AQ9UIY3 292 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 GDAQ9Y2T3 454 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 GRIN2DO15399 1336 aa16.96■□□□□ 0.31
PNKP-204ENST00000594661 CYP3A7-CYP3A51PA0A087WV96 503 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 H7C1D1 291 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 EIF3HO15372 352 aaKnown RBP eCLIP16.96■□□□□ 0.3
PNKP-204ENST00000594661 TEX33O43247 280 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 KLRC4O43908 158 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 PLA2G6O60733 806 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 CYP3A7P24462 503 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 ADCY2Q08462 1091 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 PPFIA1Q13136 1202 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 PDIA5Q14554 519 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 PRAMEF18Q5VWM3 479 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 FAM160B2Q86V87 743 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 FAM76AQ8TAV0 307 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 NELFBQ8WX92 580 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 CALML4Q96GE6 196 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 MBOAT7Q96N66 472 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 PNMA5Q96PV4 448 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 NAP1L4Q99733 375 aaKnown RBP16.96■□□□□ 0.3
PNKP-204ENST00000594661 NUDT12Q9BQG2 462 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 SPON1Q9HCB6 807 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 FEM1BQ9UK73 627 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 MAPK8IP1Q9UQF2 711 aa16.96■□□□□ 0.3
PNKP-204ENST00000594661 SPDYE3A6NKU9 549 aa16.95■□□□□ 0.3
PNKP-204ENST00000594661 CTNND1O60716 968 aaKnown RBP16.95■□□□□ 0.3
PNKP-204ENST00000594661 RHOXF2BP0C7M4 288 aa16.95■□□□□ 0.3
PNKP-204ENST00000594661 ADKP55263 362 aaKnown RBP16.95■□□□□ 0.3
PNKP-204ENST00000594661 B4GALNT4Q76KP1 1039 aa16.95■□□□□ 0.3
PNKP-204ENST00000594661 RHOXF2Q9BQY4 288 aa16.95■□□□□ 0.3
PNKP-204ENST00000594661 RAB34Q9BZG1 259 aa16.95■□□□□ 0.3
PNKP-204ENST00000594661 FHDC1Q9C0D6 1143 aaPredicted RBP16.95■□□□□ 0.3
PNKP-204ENST00000594661 MAGEF1Q9HAY2 307 aa16.95■□□□□ 0.3
PNKP-204ENST00000594661 KCNMB3Q9NPA1 279 aa16.95■□□□□ 0.3
PNKP-204ENST00000594661 GPRC5DQ9NZD1 345 aa16.95■□□□□ 0.3
PNKP-204ENST00000594661 ADD3Q9UEY8 706 aaKnown RBP16.95■□□□□ 0.3
PNKP-204ENST00000594661 DICER1Q9UPY3 1922 aaKnown RBP16.95■□□□□ 0.3
PNKP-204ENST00000594661 MYL1P05976 194 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 LMNB1P20700 586 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 SREBF1P36956 1147 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 PRCPP42785 496 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 WHAMMP3Q1A5X7 153 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 FILIP1LQ4L180 1135 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 TC2NQ8N9U0 490 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 BCAS4Q8TDM0 211 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 SNX29Q8TEQ0 813 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 TBC1D5Q92609 795 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 MRPL44Q9H9J2 332 aaKnown RBP16.94■□□□□ 0.3
PNKP-204ENST00000594661 FZD1Q9UP38 647 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 PIK3CDO00329 1044 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 MARCH6O60337 910 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 FOSP01100 380 aaPredicted RBP16.94■□□□□ 0.3
PNKP-204ENST00000594661 SKIDA1Q1XH10 827 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 ZNF483Q8TF39 744 aaPredicted RBP16.94■□□□□ 0.3
PNKP-204ENST00000594661 BLOC1S4Q9NUP1 217 aa16.94■□□□□ 0.3
PNKP-204ENST00000594661 A0A1B0GUA9 196 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 KCNB1Q14721 858 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 PLCB4Q15147 1175 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 MOXD1Q6UVY6 613 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 YTHDF3Q7Z739 585 aaKnown RBP16.93■□□□□ 0.3
PNKP-204ENST00000594661 GPC2Q8N158 579 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 LENG9Q96B70 501 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 PAGR1Q9BTK6 254 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 TRIM9Q9C026 710 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 KIAA1683Q9H0B3 1180 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 PCDHA12Q9UN75 941 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 SBF1O95248 1867 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 DOCK1Q14185 1865 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 CTAGE15A4D2H0 777 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 FAM86B1E9PN63 330 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms