RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 SNX21Q969T3 373 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 PHOX2BQ99453 314 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 PXMP2Q9NR77 195 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 MUTYHQ9UIF7 546 aa17.73■□□□□ 0.43
FOXA3-202ENST00000594297 CTSHP09668 335 aa17.72■□□□□ 0.43
FOXA3-202ENST00000594297 CLUL1Q15846 466 aa17.72■□□□□ 0.43
FOXA3-202ENST00000594297 HSDL1Q3SXM5 330 aa17.72■□□□□ 0.43
FOXA3-202ENST00000594297 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
FOXA3-202ENST00000594297 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
FOXA3-202ENST00000594297 TOP1MTQ969P6 601 aa17.72■□□□□ 0.43
FOXA3-202ENST00000594297 ZKSCAN3Q9BRR0 538 aa17.72■□□□□ 0.43
FOXA3-202ENST00000594297 MAF1Q9H063 256 aa17.72■□□□□ 0.43
FOXA3-202ENST00000594297 LIMCH1Q9UPQ0 1083 aa17.72■□□□□ 0.43
FOXA3-202ENST00000594297 TRIOO75962 3097 aa17.72■□□□□ 0.43
FOXA3-202ENST00000594297 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.71■□□□□ 0.43
FOXA3-202ENST00000594297 EIF3JO75822 258 aaKnown RBP17.71■□□□□ 0.43
FOXA3-202ENST00000594297 NR3C2P08235 984 aa17.71■□□□□ 0.43
FOXA3-202ENST00000594297 AK2P54819 239 aa17.71■□□□□ 0.43
FOXA3-202ENST00000594297 DLX2Q07687 328 aaPredicted RBP17.71■□□□□ 0.43
FOXA3-202ENST00000594297 QRICH1Q2TAL8 776 aa17.71■□□□□ 0.43
FOXA3-202ENST00000594297 MCF2L2Q86YR7 1114 aa17.71■□□□□ 0.43
FOXA3-202ENST00000594297 ADGRF4Q8IZF3 695 aa17.71■□□□□ 0.43
FOXA3-202ENST00000594297 BRF1Q92994 677 aa17.71■□□□□ 0.43
FOXA3-202ENST00000594297 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
FOXA3-202ENST00000594297 IFIH1Q9BYX4 1025 aaKnown RBP17.71■□□□□ 0.43
FOXA3-202ENST00000594297 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
FOXA3-202ENST00000594297 NAP1L2Q9ULW6 460 aaPredicted RBP17.71■□□□□ 0.43
FOXA3-202ENST00000594297 KMT2EQ8IZD2 1858 aa17.71■□□□□ 0.43
FOXA3-202ENST00000594297 KIAA1671Q9BY89 1806 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 C17orf102A2RUQ5 167 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 SH2B2O14492 632 aaPredicted RBP17.7■□□□□ 0.42
FOXA3-202ENST00000594297 TBX10O75333 385 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 RGS20O76081 388 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 GGPS1O95749 300 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 CALM1P0DP23 149 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 CALM2P0DP24 149 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 CALM3P0DP25 149 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 HOXC8P31273 242 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 CTNNB1P35222 781 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 SMAD2Q15796 467 aaKnown RBP17.7■□□□□ 0.42
FOXA3-202ENST00000594297 MYSM1Q5VVJ2 828 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 CATIPQ7Z7H3 387 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 PRSS33Q8NF86 280 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 IGDCC4Q8TDY8 1250 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 SEPT8Q92599 483 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 SPATA33Q96N06 139 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 C16orf70Q9BSU1 422 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 LRRC2Q9BYS8 371 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 SH2B1Q9NRF2 756 aaPredicted RBP17.7■□□□□ 0.42
FOXA3-202ENST00000594297 SLC12A7Q9Y666 1083 aa17.7■□□□□ 0.42
FOXA3-202ENST00000594297 OPLAHO14841 1288 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 MBTPS2O43462 519 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 CFBP00751 764 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
FOXA3-202ENST00000594297 UBA1P22314 1058 aaKnown RBP17.69■□□□□ 0.42
FOXA3-202ENST00000594297 ANTXR2P58335 489 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 HYAL1Q12794 435 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 CTC1Q2NKJ3 1217 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 HERC4Q5GLZ8 1057 aaPredicted RBP17.69■□□□□ 0.42
FOXA3-202ENST00000594297 CELF3Q5SZQ8 465 aaKnown RBP17.69■□□□□ 0.42
FOXA3-202ENST00000594297 PNMA1Q8ND90 353 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 ATP6V0A1Q93050 837 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 MFSD14AQ96MC6 490 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
FOXA3-202ENST00000594297 AGXT2Q9BYV1 514 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 MRPL11Q9Y3B7 192 aaKnown RBP17.69■□□□□ 0.42
FOXA3-202ENST00000594297 DOCK5Q9H7D0 1870 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 TECTAO75443 2155 aa17.69■□□□□ 0.42
FOXA3-202ENST00000594297 TREHO43280 583 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
FOXA3-202ENST00000594297 PPFIA4O75335 1185 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 CSPG5O95196 566 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 LINC00271P0C7V0 271 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 SMIM10L2AP0DMW4 78 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 SMIM10L2BP0DMW5 78 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 MYCLP12524 364 aaPredicted RBP17.68■□□□□ 0.42
FOXA3-202ENST00000594297 SGMS1Q86VZ5 419 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 RNF135Q8IUD6 432 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 ENAHQ8N8S7 591 aaPredicted RBP17.68■□□□□ 0.42
FOXA3-202ENST00000594297 IL31RAQ8NI17 732 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 ZNF274Q96GC6 653 aaPredicted RBP17.68■□□□□ 0.42
FOXA3-202ENST00000594297 PDCD2LQ9BRP1 358 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 USP34Q70CQ2 3546 aa17.68■□□□□ 0.42
FOXA3-202ENST00000594297 KLF18A0A0U1RQI7 1052 aa17.67■□□□□ 0.42
FOXA3-202ENST00000594297 C5orf67F2Z3F1 127 aa17.67■□□□□ 0.42
FOXA3-202ENST00000594297 K7ELQ4 463 aaPredicted RBP17.67■□□□□ 0.42
FOXA3-202ENST00000594297 GRM6O15303 877 aa17.67■□□□□ 0.42
FOXA3-202ENST00000594297 GTF2F1P35269 517 aaKnown RBP eCLIP17.67■□□□□ 0.427e-8■■■□□ 16.1
FOXA3-202ENST00000594297 HSD17B4P51659 736 aa17.67■□□□□ 0.42
FOXA3-202ENST00000594297 SP2Q02086 613 aa17.67■□□□□ 0.42
FOXA3-202ENST00000594297 SMAD4Q13485 552 aaKnown RBP17.67■□□□□ 0.42
FOXA3-202ENST00000594297 TOB2Q14106 344 aaPredicted RBP17.67■□□□□ 0.42
FOXA3-202ENST00000594297 GPKOWQ92917 476 aaPredicted RBP eCLIP17.67■□□□□ 0.42
FOXA3-202ENST00000594297 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
FOXA3-202ENST00000594297 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
FOXA3-202ENST00000594297 LY9Q9HBG7 655 aa17.67■□□□□ 0.42
FOXA3-202ENST00000594297 ADGRA3Q8IWK6 1321 aa17.67■□□□□ 0.42
FOXA3-202ENST00000594297 MYO7AQ13402 2215 aa17.66■□□□□ 0.42
FOXA3-202ENST00000594297 CCDC196A0A1B0GTZ2 297 aa17.66■□□□□ 0.42
FOXA3-202ENST00000594297 LINC01565O15544 149 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms