RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PWP2Q15269 919 aaKnown RBP23.26■■□□□ 1.31
PNKP-203ENST00000593946 CNNM4Q6P4Q7 775 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 NEK9Q8TD19 979 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 RMND1Q9NWS8 449 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 DOCK3Q8IZD9 2030 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 STRNO43815 780 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 KCNB1Q14721 858 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 TAF1CQ15572 869 aaPredicted RBP23.25■■□□□ 1.31
PNKP-203ENST00000593946 MIER3Q7Z3K6 550 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 MLKLQ8NB16 471 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 DYDC2Q96IM9 177 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 MPHOSPH6Q99547 160 aaKnown RBP23.25■■□□□ 1.31
PNKP-203ENST00000593946 LRRC27Q9C0I9 530 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 NFASCO94856 1347 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 MYMKA6NI61 221 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 PLA2G4BP0C869 781 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 KRT76Q01546 638 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 SREBF2Q12772 1141 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 DHX40Q8IX18 779 aaKnown RBP23.25■■□□□ 1.31
PNKP-203ENST00000593946 DNM3Q9UQ16 869 aa23.25■■□□□ 1.31
PNKP-203ENST00000593946 PSMC6P62333 389 aa23.24■■□□□ 1.31
PNKP-203ENST00000593946 CTTNQ14247 550 aaKnown RBP23.24■■□□□ 1.31
PNKP-203ENST00000593946 MORC4Q8TE76 937 aa23.24■■□□□ 1.31
PNKP-203ENST00000593946 IVNS1ABPQ9Y6Y0 642 aa23.24■■□□□ 1.31
PNKP-203ENST00000593946 RHOBTB3O94955 611 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 CCNE2O96020 404 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 ADORA2AP29274 412 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 SLC12A3P55017 1021 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 ASIC1P78348 528 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 ZNF746Q6NUN9 644 aaPredicted RBP23.23■■□□□ 1.31
PNKP-203ENST00000593946 GPR142Q7Z601 462 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 TPH2Q8IWU9 490 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 SENP7Q9BQF6 1050 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 DACH1Q9UI36 760 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 CPA4Q9UI42 421 aa23.23■■□□□ 1.31
PNKP-203ENST00000593946 MYH9P35579 1960 aaKnown RBP23.23■■□□□ 1.31
PNKP-203ENST00000593946 MAPK4P31152 587 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 SFNP31947 248 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 JAK3P52333 1124 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 ZNF792Q3KQV3 632 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 KMT5BQ4FZB7 885 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 RDM1Q8NG50 284 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 TCEAL9Q9UHQ7 104 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 WDR64B1ANS9 1081 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 P4HBP07237 508 aaKnown RBP23.22■■□□□ 1.31
PNKP-203ENST00000593946 TM4SF4P48230 202 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 GRB14Q14449 540 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 ZNF658Q5TYW1 1059 aaPredicted RBP23.22■■□□□ 1.31
PNKP-203ENST00000593946 SEPT14Q6ZU15 432 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 AOPEPQ8N6M6 819 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 SYT2Q8N9I0 419 aaPredicted RBP23.22■■□□□ 1.31
PNKP-203ENST00000593946 DDX12PQ92771 950 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 LXNQ9BS40 222 aa23.22■■□□□ 1.31
PNKP-203ENST00000593946 WRAP73Q9P2S5 460 aaPredicted RBP23.22■■□□□ 1.31
PNKP-203ENST00000593946 TLR2O60603 784 aa23.21■■□□□ 1.31
PNKP-203ENST00000593946 COBLO75128 1261 aa23.21■■□□□ 1.31
PNKP-203ENST00000593946 EYA4O95677 639 aa23.21■■□□□ 1.31
PNKP-203ENST00000593946 SP2Q02086 613 aa23.21■■□□□ 1.31
PNKP-203ENST00000593946 CT47A1Q5JQC4 288 aaPredicted RBP23.21■■□□□ 1.31
PNKP-203ENST00000593946 BANK1Q8NDB2 785 aa23.21■■□□□ 1.31
PNKP-203ENST00000593946 ZIC5Q96T25 663 aa23.21■■□□□ 1.31
PNKP-203ENST00000593946 JPH1Q9HDC5 661 aaPredicted RBP23.21■■□□□ 1.31
PNKP-203ENST00000593946 SAMM50Q9Y512 469 aa23.21■■□□□ 1.31
PNKP-203ENST00000593946 PVALEFA0A1B0GWK0 134 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 ASB14A6NK59 587 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 BECN2A8MW95 431 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 IKBKBO14920 756 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 SSBP05455 408 aaKnown RBP eCLIP23.2■■□□□ 1.3
PNKP-203ENST00000593946 CYP11B2P19099 503 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 C17orf99Q6UX52 265 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 UNC13DQ70J99 1090 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 PLEKHH3Q7Z736 793 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 GPBP1Q86WP2 473 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 DNAJC19Q96DA6 116 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 BCAS3Q9H6U6 928 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 SLC9A2Q9UBY0 812 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 MGAMO43451 1857 aa23.2■■□□□ 1.3
PNKP-203ENST00000593946 TGFB3P10600 412 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 CYP4F22Q6NT55 531 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 DYMQ7RTS9 669 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 SMAP1Q8IYB5 467 aaPredicted RBP23.19■■□□□ 1.3
PNKP-203ENST00000593946 SMYD4Q8IYR2 804 aaPredicted RBP23.19■■□□□ 1.3
PNKP-203ENST00000593946 CCDC47Q96A33 483 aaKnown RBP23.19■■□□□ 1.3
PNKP-203ENST00000593946 NACC1Q96RE7 527 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 BHMT2Q9H2M3 363 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 ZSWIM4Q9H7M6 989 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 EXOC1Q9NV70 894 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 PPP1R3GB7ZBB8 358 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 GOLGA6L19H0YKK7 550 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 CD44P16070 742 aaKnown RBP23.19■■□□□ 1.3
PNKP-203ENST00000593946 QARSP47897 775 aaKnown RBP23.19■■□□□ 1.3
PNKP-203ENST00000593946 NCAPHQ15003 741 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 ARSHQ5FYA8 562 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 ZNF467Q7Z7K2 595 aaPredicted RBP23.19■■□□□ 1.3
PNKP-203ENST00000593946 PIGOQ8TEQ8 1089 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 ZFYVE28Q9HCC9 887 aa23.19■■□□□ 1.3
PNKP-203ENST00000593946 MYH11P35749 1972 aa23.18■■□□□ 1.3
PNKP-203ENST00000593946 LYPLA2O95372 231 aa23.18■■□□□ 1.3
PNKP-203ENST00000593946 UBA1P22314 1058 aaKnown RBP23.18■■□□□ 1.3
PNKP-203ENST00000593946 ERCC5P28715 1186 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms