RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 THPOP40225 353 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 DYNLL1P63167 89 aaKnown RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 ITIH3Q06033 890 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 ADCY1Q08828 1119 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 TRIM26Q12899 539 aaPredicted RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 FKBP5Q13451 457 aaPredicted RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 ATP2B3Q16720 1220 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 TPRNQ4KMQ1 711 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 FAM83BQ5T0W9 1011 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 SPTY2D1Q68D10 685 aaPredicted RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 CCDC102BQ68D86 513 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 RNF43Q68DV7 783 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 ADGRA1Q86SQ6 560 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 SIAH1Q8IUQ4 282 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 CCDC146Q8IYE0 955 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 SLC44A3Q8N4M1 653 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 FAM160A2Q8N612 972 aaPredicted RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 CELF5Q8N6W0 485 aaKnown RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 FAM181AQ8N9Y4 354 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.76□□□□□ -1.81
VRK3-204ENST00000593912 RASGRP4Q8TDF6 673 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 SEPT8Q92599 483 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 KAT2BQ92831 832 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 ACSF2Q96CM8 615 aaPredicted RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 NUP88Q99567 741 aaPredicted RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 ALG1Q9BT22 464 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 WDR11Q9BZH6 1224 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 BICC1Q9H694 974 aaKnown RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 VCPKMTQ9H867 229 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 JADE2Q9NQC1 790 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 PRMT8Q9NR22 394 aaPredicted RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 RAI14Q9P0K7 980 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 GTF2IRD1Q9UHL9 959 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 HCFC2Q9Y5Z7 792 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 NF1P21359 2839 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 SETD2Q9BYW2 2564 aaPredicted RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 SPENQ96T58 3664 aaKnown RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 LOXHD1Q8IVV2 1947 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 TSC2P49815 1807 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 CACNA1EQ15878 2313 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 KANSL1LA0AUZ9 987 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 ASB14A6NK59 587 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 FAM170BA6NMN3 283 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 C4orf47A7E2U8 309 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 F5H6K3 240 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 DGKIO75912 1065 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 MAP4K4O95819 1239 aaPredicted RBP3.75□□□□□ -1.81
VRK3-204ENST00000593912 LDHCP07864 332 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 ZNF806P0C7X5 589 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 KRT10P13645 584 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 IBSPP21815 317 aaPredicted RBP3.75□□□□□ -1.81
VRK3-204ENST00000593912 TARSP26639 723 aaKnown RBP3.75□□□□□ -1.81
VRK3-204ENST00000593912 HOXC13P31276 330 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 STARD6P59095 220 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 GSTO1P78417 241 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 CFHR1Q03591 330 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 FLIIQ13045 1269 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 MTAPQ13126 283 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 PTK7Q13308 1070 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 SNW1Q13573 536 aaKnown RBP3.75□□□□□ -1.81
VRK3-204ENST00000593912 PTPN14Q15678 1187 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 CCDC27Q2M243 656 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 NAALADL2Q58DX5 795 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 ATAT1Q5SQI0 421 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 BEND3Q5T5X7 828 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 HIST2H2BCQ6DN03 193 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 TMC5Q6UXY8 1006 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 CCDC149Q6ZUS6 474 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 SESTD1Q86VW0 696 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 CHCHD4Q8N4Q1 142 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 ANKRD44Q8N8A2 993 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 DEFB124Q8NES8 71 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 CASP10Q92851 521 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 EDEM2Q9BV94 578 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 CCDC86Q9H6F5 360 aaKnown RBP3.75□□□□□ -1.81
VRK3-204ENST00000593912 SCUBE2Q9NQ36 999 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 A1CFQ9NQ94 594 aaKnown RBP3.75□□□□□ -1.81
VRK3-204ENST00000593912 ENTPD7Q9NQZ7 604 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 IGSF9Q9P2J2 1179 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 SERPINB13Q9UIV8 391 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 SPAG17Q6Q759 2223 aa3.75□□□□□ -1.81
VRK3-204ENST00000593912 FNDC1Q4ZHG4 1894 aaPredicted RBP3.75□□□□□ -1.81
VRK3-204ENST00000593912 LAMA4Q16363 1823 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 COL6A6A6NMZ7 2263 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 SPAARA0A1B0GVQ0 90 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 FSD2A1L4K1 749 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 A6NJR5 290 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 CHURC1-FNTBB4DL54 471 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 USP17L12C9JPN9 530 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 USP17L21D6R901 530 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 FOXD2O60548 495 aaPredicted RBP3.74□□□□□ -1.81
VRK3-204ENST00000593912 FGF18O76093 207 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 ARIH2O95376 493 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 NBPF7P0C2Y1 421 aaPredicted RBP3.74□□□□□ -1.81
VRK3-204ENST00000593912 ZNF853P0CG23 659 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 EPCAMP16422 314 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 PDE4AP27815 886 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 GBP2P32456 591 aaPredicted RBP3.74□□□□□ -1.81
VRK3-204ENST00000593912 FNTBP49356 437 aa3.74□□□□□ -1.81
VRK3-204ENST00000593912 FGD1P98174 961 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms