RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
PNKP-202ENST00000593706 NLRX1Q86UT6 975 aa16.96■□□□□ 0.31
PNKP-202ENST00000593706 ZNF654Q8IZM8 581 aa16.96■□□□□ 0.31
PNKP-202ENST00000593706 TOP1MTQ969P6 601 aa16.96■□□□□ 0.31
PNKP-202ENST00000593706 ESYT1Q9BSJ8 1104 aa16.96■□□□□ 0.31
PNKP-202ENST00000593706 MYL10Q9BUA6 226 aa16.96■□□□□ 0.31
PNKP-202ENST00000593706 LSG1Q9H089 658 aaKnown RBP16.96■□□□□ 0.31
PNKP-202ENST00000593706 DDAH1O94760 285 aa16.95■□□□□ 0.3
PNKP-202ENST00000593706 SSTR3P32745 418 aaPredicted RBP16.95■□□□□ 0.3
PNKP-202ENST00000593706 ANTXR2P58335 489 aa16.95■□□□□ 0.3
PNKP-202ENST00000593706 GPM6BQ13491 265 aa16.95■□□□□ 0.3
PNKP-202ENST00000593706 LEXMQ3ZCV2 418 aa16.95■□□□□ 0.3
PNKP-202ENST00000593706 NFXL1Q6ZNB6 911 aa16.95■□□□□ 0.3
PNKP-202ENST00000593706 EP400NLQ6ZTU2 488 aa16.95■□□□□ 0.3
PNKP-202ENST00000593706 MB21D2Q8IYB1 491 aaPredicted RBP16.95■□□□□ 0.3
PNKP-202ENST00000593706 GIMAP8Q8ND71 665 aaPredicted RBP16.95■□□□□ 0.3
PNKP-202ENST00000593706 OSBPL7Q9BZF2 842 aa16.95■□□□□ 0.3
PNKP-202ENST00000593706 RBM8AQ9Y5S9 174 aaKnown RBP16.95■□□□□ 0.3
PNKP-202ENST00000593706 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.94■□□□□ 0.3
PNKP-202ENST00000593706 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.94■□□□□ 0.3
PNKP-202ENST00000593706 FAM86C2PA6NEL3 165 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 TCF7P36402 384 aaPredicted RBP16.94■□□□□ 0.3
PNKP-202ENST00000593706 PTCRAQ6ISU1 281 aaPredicted RBP16.94■□□□□ 0.3
PNKP-202ENST00000593706 XRRA1Q6P2D8 792 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 TMEM192Q8IY95 271 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 BANK1Q8NDB2 785 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 IGDCC4Q8TDY8 1250 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 KHSRPQ92945 711 aaKnown RBP eCLIP16.94■□□□□ 0.3
PNKP-202ENST00000593706 MAP3K14Q99558 947 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 SENP7Q9BQF6 1050 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 LY9Q9HBG7 655 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 TELO2Q9Y4R8 837 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 PLXNA4Q9HCM2 1894 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 NRCAMQ92823 1304 aa16.94■□□□□ 0.3
PNKP-202ENST00000593706 H3BNC9 293 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 PIK3CDO00329 1044 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 GHRP10912 638 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 IL9P15248 144 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 CTNNB1P35222 781 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 COL9A3Q14050 684 aaPredicted RBP16.93■□□□□ 0.3
PNKP-202ENST00000593706 FAM178BQ8IXR5 827 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 GPRASP2Q96D09 838 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 CDHR1Q96JP9 859 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 LZTS2Q9BRK4 669 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 CD320Q9NPF0 282 aa16.93■□□□□ 0.3
PNKP-202ENST00000593706 FNDC1Q4ZHG4 1894 aaPredicted RBP16.93■□□□□ 0.3
PNKP-202ENST00000593706 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 H3BQ06 376 aaPredicted RBP16.92■□□□□ 0.3
PNKP-202ENST00000593706 MEIS2O14770 477 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 PRC1O43663 620 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 PLEKHA8P1O95397 391 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 MARK3P27448 753 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 GNAQP50148 359 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 PPFIA1Q13136 1202 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 TCEAL5Q5H9L2 206 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 FAM26DQ5JW98 314 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 TAF2Q6P1X5 1199 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 RSPH3Q86UC2 560 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 GJD3Q8N144 294 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 FIBCD1Q8N539 461 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.92■□□□□ 0.3
PNKP-202ENST00000593706 IL17RAQ96F46 866 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 NSUN3Q9H649 340 aaKnown RBP16.92■□□□□ 0.3
PNKP-202ENST00000593706 PKD2L1Q9P0L9 805 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 TUBE1Q9UJT0 475 aa16.92■□□□□ 0.3
PNKP-202ENST00000593706 GPR37L1O60883 481 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 RXRAP19793 462 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 SMARCA1P28370 1054 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 MCM5P33992 734 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 ADAM17P78536 824 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 MTMR1Q13613 665 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 PUS10Q3MIT2 529 aaKnown RBP16.91■□□□□ 0.3
PNKP-202ENST00000593706 RUFY4Q6ZNE9 571 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 CMTR1Q8N1G2 835 aaKnown RBP16.91■□□□□ 0.3
PNKP-202ENST00000593706 GLG1Q92896 1179 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 ERAP1Q9NZ08 941 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 ADGRA3Q8IWK6 1321 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 PIEZO1Q92508 2521 aa16.91■□□□□ 0.3
PNKP-202ENST00000593706 GRXCR2A6NFK2 248 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 SPDYE3A6NKU9 549 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 CHRNA1P02708 482 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 CALM1P0DP23 149 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 CALM2P0DP24 149 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 CALM3P0DP25 149 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 KCNA2P16389 499 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 GRIK4Q16099 956 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 UBE2SQ16763 222 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 PABPC5Q96DU9 382 aaKnown RBP16.9■□□□□ 0.3
PNKP-202ENST00000593706 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 C11orf84Q9BUA3 381 aaPredicted RBP16.9■□□□□ 0.3
PNKP-202ENST00000593706 C11orf16Q9NQ32 467 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 CLDND1Q9NY35 253 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 FAM50BQ9Y247 325 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 RWDD3Q9Y3V2 267 aa16.9■□□□□ 0.3
PNKP-202ENST00000593706 PI4K2BG5E9Z4 385 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 SLC27A2O14975 620 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 ATP9AO75110 1047 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms