RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 BAG4O95429 457 aaKnown RBP16.87■□□□□ 0.29
DDX39A-221ENST00000593026 RTP1P59025 263 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 SNX17Q15036 470 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 TRIM60Q495X7 471 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 RILPL1Q5EBL4 403 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 C1orf53Q5VUE5 145 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 BRAPQ7Z569 592 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 FERMT3Q86UX7 667 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 TRIM50Q86XT4 487 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 SLFN12Q8IYM2 578 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 KAT2BQ92831 832 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 C16orf70Q9BSU1 422 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 ZNF215Q9UL58 517 aaPredicted RBP16.87■□□□□ 0.29
DDX39A-221ENST00000593026 MTMR6Q9Y217 621 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 ATP11BQ9Y2G3 1177 aa16.87■□□□□ 0.29
DDX39A-221ENST00000593026 SCN10AQ9Y5Y9 1956 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 H3BRB1 525 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 ARVCFO00192 962 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 PDIA4P13667 645 aaKnown RBP16.86■□□□□ 0.29
DDX39A-221ENST00000593026 PSEN2P49810 448 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 TOB1P50616 345 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-221ENST00000593026 NBR1Q14596 966 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 MFSD10Q14728 455 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 ZNF174Q15697 407 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 NBPF20Q3BBV1 942 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 SMAP1Q8IYB5 467 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-221ENST00000593026 DPF3Q92784 378 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 HAS1Q92839 578 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 GLG1Q92896 1179 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 SEZ6LQ9BYH1 1024 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 UNC45AQ9H3U1 944 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 TUT1Q9H6E5 874 aaKnown RBP16.86■□□□□ 0.29
DDX39A-221ENST00000593026 AZI2Q9H6S1 392 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 SAMM50Q9Y512 469 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 GRIN2DO15399 1336 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 EMSYQ7Z589 1322 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 ALPK3Q96L96 1907 aa16.86■□□□□ 0.29
DDX39A-221ENST00000593026 MKI67P46013 3256 aaKnown RBP16.85■□□□□ 0.29
DDX39A-221ENST00000593026 WDR64B1ANS9 1081 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 HAS3O00219 553 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 CHMP2AO43633 222 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 EVI5O60447 810 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 ATG7O95352 703 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 SUPT20HL2P0C7V6 817 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 JAK3P52333 1124 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 KIAA0753Q2KHM9 967 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 FAM47CQ5HY64 1035 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 MIS18BP1Q6P0N0 1132 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 ABHD15Q6UXT9 468 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 SLC43A3Q8NBI5 491 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 SMARCAD1Q9H4L7 1026 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 PCDHB6Q9Y5E3 794 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 PCDHA10Q9Y5I2 948 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 MROH7Q68CQ1 1323 aa16.85■□□□□ 0.29
DDX39A-221ENST00000593026 BACH1O14867 736 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 PQBP1O60828 265 aaKnown RBP16.84■□□□□ 0.29
DDX39A-221ENST00000593026 LGR5O75473 907 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 PSAPP07602 524 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 SFNP31947 248 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 CDK7P50613 346 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 RESTQ13127 1097 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 FAM160B1Q5W0V3 765 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 NFRKBQ6P4R8 1299 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 ANKRD33Q7Z3H0 272 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 MIER3Q7Z3K6 550 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 C7orf61Q8IZ16 206 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 C7orf31Q8N865 590 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 PPP1R13LQ8WUF5 828 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 PCYT2Q99447 389 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 TMEM60Q9H2L4 133 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 DISC1Q9NRI5 854 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 ERAP1Q9NZ08 941 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 VAV3Q9UKW4 847 aa16.84■□□□□ 0.29
DDX39A-221ENST00000593026 IGKV6D-21A0A0A0MT36 114 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 DCDC2CA8MYV0 355 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 TLR3O15455 904 aaKnown RBP16.83■□□□□ 0.28
DDX39A-221ENST00000593026 OR52Z1P0C646 297 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 MARK3P27448 753 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 TXKP42681 527 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 STAT5BP51692 787 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 TLE2Q04725 743 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 PTPN11Q06124 597 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-221ENST00000593026 PPP2R5CQ13362 524 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 SWSAP1Q6NVH7 229 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 B3GNT9Q6UX72 402 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 PLPPR4Q7Z2D5 763 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 CCDC60Q8IWA6 550 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-221ENST00000593026 RDM1Q8NG50 284 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 TOX2Q96NM4 488 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 MTMR9Q96QG7 549 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 ZSCAN16Q9H4T2 348 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-221ENST00000593026 TTC12Q9H892 705 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-221ENST00000593026 ZNF302Q9NR11 478 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.83■□□□□ 0.28
DDX39A-221ENST00000593026 PCDHA12Q9UN75 941 aa16.83■□□□□ 0.28
DDX39A-221ENST00000593026 ANP32AP39687 249 aaKnown RBP16.82■□□□□ 0.28
DDX39A-221ENST00000593026 SLC26A2P50443 739 aa16.82■□□□□ 0.28
DDX39A-221ENST00000593026 NCAPH2Q6IBW4 605 aa16.82■□□□□ 0.28
DDX39A-221ENST00000593026 SESTD1Q86VW0 696 aa16.82■□□□□ 0.28
DDX39A-221ENST00000593026 FAM126BQ8IXS8 530 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms