RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
RANBP3-230ENST00000593025 MAF1Q9H063 256 aa12.56□□□□□ -0.4
RANBP3-230ENST00000593025 IRF2BPLQ9H1B7 796 aa12.56□□□□□ -0.4
RANBP3-230ENST00000593025 TUT1Q9H6E5 874 aaKnown RBP12.56□□□□□ -0.4
RANBP3-230ENST00000593025 EP300Q09472 2414 aaPredicted RBP12.55□□□□□ -0.4
RANBP3-230ENST00000593025 ENPP3O14638 875 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 ARP10275 920 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 HSD17B4P51659 736 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 NUBP1P53384 320 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 MGAT3Q09327 533 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 BTG3Q14201 252 aaPredicted RBP12.55□□□□□ -0.4
RANBP3-230ENST00000593025 LPIN1Q14693 890 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 ARHGEF16Q5VV41 709 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 OTUD7AQ8TE49 926 aaPredicted RBP12.55□□□□□ -0.4
RANBP3-230ENST00000593025 RIPOR3Q96MK2 946 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 PDCD2LQ9BRP1 358 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 SETD4Q9NVD3 440 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
RANBP3-230ENST00000593025 MED19A0JLT2 244 aaPredicted RBP12.54□□□□□ -0.4
RANBP3-230ENST00000593025 GHRP10912 638 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 ATF7P17544 494 aaPredicted RBP12.54□□□□□ -0.4
RANBP3-230ENST00000593025 ID4P47928 161 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 QRICH1Q2TAL8 776 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 RRP12Q5JTH9 1297 aaKnown RBP12.54□□□□□ -0.4
RANBP3-230ENST00000593025 RUFY4Q6ZNE9 571 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
RANBP3-230ENST00000593025 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 ADGRF4Q8IZF3 695 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 KLHL23Q8NBE8 558 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 LMBR1Q8WVP7 490 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
RANBP3-230ENST00000593025 SMOC2Q9H3U7 446 aa12.54□□□□□ -0.4
RANBP3-230ENST00000593025 CCER2I3L3R5 266 aa12.53□□□□□ -0.4
RANBP3-230ENST00000593025 PPP1R11O60927 126 aaPredicted RBP12.53□□□□□ -0.4
RANBP3-230ENST00000593025 KDM4AO75164 1064 aa12.53□□□□□ -0.4
RANBP3-230ENST00000593025 KCNC3Q14003 757 aa12.53□□□□□ -0.4
RANBP3-230ENST00000593025 ALX1Q15699 326 aa12.53□□□□□ -0.4
RANBP3-230ENST00000593025 RTN4RL1Q86UN2 441 aaPredicted RBP12.53□□□□□ -0.4
RANBP3-230ENST00000593025 VSIG10LQ86VR7 867 aa12.53□□□□□ -0.4
RANBP3-230ENST00000593025 POF1BQ8WVV4 589 aa12.53□□□□□ -0.4
RANBP3-230ENST00000593025 S1PR5Q9H228 398 aa12.53□□□□□ -0.4
RANBP3-230ENST00000593025 CEP250Q9BV73 2442 aa12.53□□□□□ -0.4
RANBP3-230ENST00000593025 PER2O15055 1255 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 BRD1O95696 1058 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 HSPD1P10809 573 aaKnown RBP12.52□□□□□ -0.41
RANBP3-230ENST00000593025 GATMP50440 423 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 SEMA3FQ13275 785 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 PGM5Q15124 567 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 NAALADL2Q58DX5 795 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 GPATCH4Q5T3I0 446 aaKnown RBP12.52□□□□□ -0.41
RANBP3-230ENST00000593025 STOX1Q6ZVD7 989 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 MCF2L2Q86YR7 1114 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 TBC1D10CQ8IV04 446 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 CMTR2Q8IYT2 770 aaKnown RBP12.52□□□□□ -0.41
RANBP3-230ENST00000593025 TTC14Q96N46 770 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 AGO3Q9H9G7 860 aaKnown RBP12.52□□□□□ -0.41
RANBP3-230ENST00000593025 JMJD4Q9H9V9 463 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 CDH22Q9UJ99 828 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 CHD6Q8TD26 2715 aa12.52□□□□□ -0.41
RANBP3-230ENST00000593025 LAMA4Q16363 1823 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 LOXHD1Q8IVV2 1947 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 CFBP00751 764 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 FGAP02671 866 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 MYCLP12524 364 aaPredicted RBP12.51□□□□□ -0.41
RANBP3-230ENST00000593025 DUSP6Q16828 381 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 FBXO47Q5MNV8 452 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 SYCE2Q6PIF2 218 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 KCNV1Q6PIU1 500 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 ADSSL1Q8N142 457 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 GPR20Q99678 358 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 ZKSCAN3Q9BRR0 538 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 DCTPP1Q9H773 170 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 TOMM22Q9NS69 142 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 NEDD4P46934 1319 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 CCDC171Q6TFL3 1326 aa12.51□□□□□ -0.41
RANBP3-230ENST00000593025 FNDC1Q4ZHG4 1894 aaPredicted RBP12.51□□□□□ -0.41
RANBP3-230ENST00000593025 KRT37O76014 449 aa12.5□□□□□ -0.41
RANBP3-230ENST00000593025 TGFB3P10600 412 aa12.5□□□□□ -0.41
RANBP3-230ENST00000593025 SP100P23497 879 aaPredicted RBP12.5□□□□□ -0.41
RANBP3-230ENST00000593025 HOXA13P31271 388 aaPredicted RBP12.5□□□□□ -0.41
RANBP3-230ENST00000593025 HAND2P61296 217 aa12.5□□□□□ -0.41
RANBP3-230ENST00000593025 ARHGAP4P98171 946 aa12.5□□□□□ -0.41
RANBP3-230ENST00000593025 KREMEN2Q8NCW0 462 aa12.5□□□□□ -0.41
RANBP3-230ENST00000593025 NKD2Q969F2 451 aaPredicted RBP12.5□□□□□ -0.41
RANBP3-230ENST00000593025 PPP2R3CQ969Q6 453 aa12.5□□□□□ -0.41
RANBP3-230ENST00000593025 TLE6Q9H808 572 aa12.5□□□□□ -0.41
RANBP3-230ENST00000593025 MRPL11Q9Y3B7 192 aaKnown RBP12.5□□□□□ -0.41
RANBP3-230ENST00000593025 TTC41PQ6P2S7 1318 aa12.5□□□□□ -0.41
RANBP3-230ENST00000593025 MYO10Q9HD67 2058 aa12.5□□□□□ -0.41
RANBP3-230ENST00000593025 ACACBO00763 2458 aa12.49□□□□□ -0.41
RANBP3-230ENST00000593025 ZMYM6O95789 1325 aa12.49□□□□□ -0.41
RANBP3-230ENST00000593025 SALL3Q9BXA9 1300 aa12.49□□□□□ -0.41
RANBP3-230ENST00000593025 FSCN2O14926 492 aa12.49□□□□□ -0.41
RANBP3-230ENST00000593025 ERVFC1P60507 584 aa12.49□□□□□ -0.41
RANBP3-230ENST00000593025 MRPS9P82933 396 aaKnown RBP12.49□□□□□ -0.41
RANBP3-230ENST00000593025 SLC35G1Q2M3R5 365 aa12.49□□□□□ -0.41
RANBP3-230ENST00000593025 PAN2Q504Q3 1202 aaKnown RBP12.49□□□□□ -0.41
RANBP3-230ENST00000593025 MARCH8Q5T0T0 291 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms