RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 CALUO43852 315 aaPredicted RBP11.51□□□□□ -0.57
VPS25-206ENST00000591584 LYPLA2O95372 231 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 GYPCP04921 128 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 P4HBP07237 508 aaKnown RBP11.51□□□□□ -0.57
VPS25-206ENST00000591584 ALAS1P13196 640 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 RPL13P26373 211 aaKnown RBP11.51□□□□□ -0.57
VPS25-206ENST00000591584 KRT9P35527 623 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 CDK17Q00537 523 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 BMT2Q1RMZ1 405 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 RNF207Q6ZRF8 634 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 REXO1L1PQ8IX06 675 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 ZC3H3Q8IXZ2 948 aaKnown RBP11.51□□□□□ -0.57
VPS25-206ENST00000591584 NLGN2Q8NFZ4 835 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 CYP2W1Q8TAV3 490 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 SYTL5Q8TDW5 730 aaPredicted RBP11.51□□□□□ -0.57
VPS25-206ENST00000591584 GJA10Q969M2 543 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 TRERF1Q96PN7 1200 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 NUCKS1Q9H1E3 243 aaKnown RBP11.51□□□□□ -0.57
VPS25-206ENST00000591584 RAVER2Q9HCJ3 691 aaKnown RBP11.51□□□□□ -0.57
VPS25-206ENST00000591584 OLFML3Q9NRN5 406 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 ABHD10Q9NUJ1 306 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 TCEAL9Q9UHQ7 104 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 ODF2LQ9ULJ1 636 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 ZHX2Q9Y6X8 837 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 UBE4BO95155 1302 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 PHLPP2Q6ZVD8 1323 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 USP27XA6NNY8 438 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 TRAF5O00463 557 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 PDXKO00764 312 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 EIF3DO15371 548 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS25-206ENST00000591584 PPP1R12BO60237 982 aaPredicted RBP11.5□□□□□ -0.57
VPS25-206ENST00000591584 DKC1O60832 514 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS25-206ENST00000591584 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 MAPTP10636 758 aaKnown RBP11.5□□□□□ -0.57
VPS25-206ENST00000591584 SFNP31947 248 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 ZBED6P86452 979 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 PABPC4Q13310 644 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS25-206ENST00000591584 TUBB2AQ13885 445 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 NFIL3Q16649 462 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 KNOP1Q1ED39 458 aaKnown RBP11.5□□□□□ -0.57
VPS25-206ENST00000591584 ZCWPW2Q504Y3 356 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 ARSHQ5FYA8 562 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 RINT1Q6NUQ1 792 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 POTEEQ6S8J3 1075 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 CATSPERGQ6ZRH7 1159 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 NLRX1Q86UT6 975 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 CCDC170Q8IYT3 715 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 SLC17A8Q8NDX2 589 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 DCPSQ96C86 337 aaKnown RBP11.5□□□□□ -0.57
VPS25-206ENST00000591584 CDHR1Q96JP9 859 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 DNAJC7Q99615 494 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 TUBB2BQ9BVA1 445 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 BHMT2Q9H2M3 363 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 NDST4Q9H3R1 872 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 ZSWIM4Q9H7M6 989 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 METTL14Q9HCE5 456 aaKnown RBP11.5□□□□□ -0.57
VPS25-206ENST00000591584 KCNH7Q9NS40 1196 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 GGA3Q9NZ52 723 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
VPS25-206ENST00000591584 MYO1AQ9UBC5 1043 aa11.5□□□□□ -0.57
VPS25-206ENST00000591584 EML1O00423 815 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 PES1O00541 588 aaKnown RBP11.49□□□□□ -0.57
VPS25-206ENST00000591584 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
VPS25-206ENST00000591584 CTIFO43310 598 aaKnown RBP11.49□□□□□ -0.57
VPS25-206ENST00000591584 FAM13AO94988 1023 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 ARP10275 920 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 TRIM21P19474 475 aaKnown RBP11.49□□□□□ -0.57
VPS25-206ENST00000591584 GUCY2CP25092 1073 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 JAK3P52333 1124 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 RPS6P62753 249 aaKnown RBP11.49□□□□□ -0.57
VPS25-206ENST00000591584 KRT83P78385 493 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 ADAM9Q13443 819 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 ALCAMQ13740 583 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 MIIPQ5JXC2 388 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 LRRC55Q6ZSA7 311 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 C1orf186Q6ZWK4 172 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 EPM2AIP1Q7L775 607 aaPredicted RBP11.49□□□□□ -0.57
VPS25-206ENST00000591584 MIER3Q7Z3K6 550 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 TPH2Q8IWU9 490 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.49□□□□□ -0.57
VPS25-206ENST00000591584 GOLGA5Q8TBA6 731 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 TRPM4Q8TD43 1214 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
VPS25-206ENST00000591584 SCFD1Q8WVM8 642 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 GPRASP2Q96D09 838 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 DYDC2Q96IM9 177 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 MAP7D2Q96T17 732 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 AGO4Q9HCK5 861 aaKnown RBP11.49□□□□□ -0.57
VPS25-206ENST00000591584 DBR1Q9UK59 544 aaKnown RBP11.49□□□□□ -0.57
VPS25-206ENST00000591584 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
VPS25-206ENST00000591584 B4DLN1 442 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 NFIBO00712 420 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 SLC16A3O15427 465 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms