RNA–Protein interactions for RNA: ENST00000590930.5

CHUK-204, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 1 (best)

Gene CHUK, Length 4,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-204ENST00000590930 YBX3P16989 372 aaKnown RBP eCLIP4.53□□□□□ -1.68
CHUK-204ENST00000590930 GNAT2P19087 354 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 RAP1GDS1P52306 607 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 MYBPC2Q14324 1141 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ADCK5Q3MIX3 580 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ZCWPW2Q504Y3 356 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 MEI1Q5TIA1 1274 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PPP4R3CPQ6ZMV5 832 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 SPATA21Q7Z572 469 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 LSMEM2Q8N112 164 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 DUS3LQ96G46 650 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 BICC1Q9H694 974 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 STARD13Q9Y3M8 1113 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 XIRP1Q702N8 1843 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 MAP3K19Q56UN5 1328 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PVALEFA0A1B0GWK0 134 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 MATN2O00339 956 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 CASQ2O14958 399 aaPredicted RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 ZNF189O75820 626 aaPredicted RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 CALM1P0DP23 149 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 CALM2P0DP24 149 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 CALM3P0DP25 149 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 BMP6P22004 513 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ATP5DP30049 168 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PTPN7P35236 360 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 YARSP54577 528 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 ATP6V0D1P61421 351 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ATP2C1P98194 919 aaPredicted RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 R3HDM1Q15032 1099 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 CHRNA2Q15822 529 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 IMMTQ16891 758 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 OR52E8Q6IFG1 317 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 NLRP4Q96MN2 994 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 MED15Q96RN5 788 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 C7orf25Q9BPX7 421 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 LRRC27Q9C0I9 530 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 RXFP1Q9HBX9 757 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 SCHIP1Q9P0W5 487 aaPredicted RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 CPSF2Q9P2I0 782 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 SUCLA2Q9P2R7 463 aaPredicted RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 VPS28Q9UK41 221 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 BICDL2A1A5D9 508 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 KLF11O14901 512 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 SLC22A2O15244 555 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 MAPK13O15264 365 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 MMP1P03956 469 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PABPC4LP0CB38 370 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 SCP2P22307 547 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 NMIQ13287 307 aaPredicted RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 SART3Q15020 963 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 VWA3BQ502W6 1294 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ACBD5Q5T8D3 534 aaPredicted RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 PPP1R2P3Q6NXS1 205 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ZNF449Q6P9G9 518 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PACS1Q6VY07 963 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.53□□□□□ -1.68
CHUK-204ENST00000590930 HOOK3Q86VS8 718 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 CERS3Q8IU89 383 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ZCRB1Q8TBF4 217 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 ASAP3Q8TDY4 903 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 IFT81Q8WYA0 676 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 DHX38Q92620 1227 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 GATA6Q92908 595 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 CEP95Q96GE4 821 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 CCT8L2Q96SF2 557 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 TPX2Q9ULW0 747 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 PRR36Q9H6K5 1346 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PLSCR1O15162 318 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PRPF4O43172 522 aaKnown RBP eCLIP4.53□□□□□ -1.68
CHUK-204ENST00000590930 FIBPO43427 364 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PROZP22891 400 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ERVK-24P63145 666 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 BTKQ06187 659 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 LSAMPQ13449 338 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 TCP11X2Q5H9J9 407 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 STXBP5Q5T5C0 1151 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PPP1R42Q7Z4L9 355 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 C17orf53Q8N3J3 647 aaPredicted RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 FBXO36Q8NEA4 188 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 CAGE1Q8TC20 777 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 CEP63Q96MT8 703 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 MXD3Q9BW11 206 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 TDRD1Q9BXT4 1180 aaKnown RBP4.53□□□□□ -1.68
CHUK-204ENST00000590930 ZSWIM4Q9H7M6 989 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ZNF212Q9UDV6 495 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 PCYOX1Q9UHG3 505 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 USP16Q9Y5T5 823 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 RPS6KL1Q9Y6S9 549 aa4.53□□□□□ -1.68
CHUK-204ENST00000590930 ZSWIM8A7E2V4 1837 aa4.52□□□□□ -1.69
CHUK-204ENST00000590930 A0A088AWK7 358 aa4.52□□□□□ -1.69
CHUK-204ENST00000590930 DDAH1O94760 285 aa4.52□□□□□ -1.69
CHUK-204ENST00000590930 FGFR1OPO95684 399 aaKnown RBP4.52□□□□□ -1.69
CHUK-204ENST00000590930 DDX58O95786 925 aaKnown RBP4.52□□□□□ -1.69
CHUK-204ENST00000590930 GGCXP38435 758 aa4.52□□□□□ -1.69
CHUK-204ENST00000590930 SYKP43405 635 aa4.52□□□□□ -1.69
CHUK-204ENST00000590930 GNAQP50148 359 aa4.52□□□□□ -1.69
CHUK-204ENST00000590930 PPP2R2AP63151 447 aa4.52□□□□□ -1.69
CHUK-204ENST00000590930 TUBA4AP68366 448 aa4.52□□□□□ -1.69
CHUK-204ENST00000590930 ECM1Q16610 540 aa4.52□□□□□ -1.69
CHUK-204ENST00000590930 KBTBD12Q3ZCT8 623 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms