RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 SEC23AQ15436 765 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 RNF10Q8N5U6 811 aaKnown RBP18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 ZNF577Q9BSK1 485 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 FUT8Q9BYC5 575 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 DBNDD1Q9H9R9 158 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 VPS41P49754 854 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 CTTNQ14247 550 aaKnown RBP18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 SFR1Q86XK3 245 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 SYDE2Q5VT97 1194 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 CEP128Q6ZU80 1094 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 IWS1Q96ST2 819 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 PCIF1Q9H4Z3 704 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 ADGRF4Q8IZF3 695 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 BAIAP2L1Q9UHR4 511 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 MAGEA9P43362 315 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 SARSP49591 514 aaKnown RBP18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 PKN1Q16512 942 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 C6orf163Q5TEZ5 329 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 MAIP1Q8WWC4 291 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 POLD4Q9HCU8 107 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 KCND1Q9NSA2 647 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 NOVA2Q9UNW9 492 aaKnown RBP18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 ATP2A2P16615 1042 aaKnown RBP18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 DLGAP5Q15398 846 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 TNNI1P19237 187 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 ADCY8P40145 1251 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 ATP11AP98196 1134 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 CUL1Q13616 776 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 NAA25Q14CX7 972 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 XKR9Q5GH70 373 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 TMC4Q7Z404 712 aa18.64■□□□□ 0.57
SMARCA4-215ENST00000590574 HMGB1P1B2RPK0 211 aaPredicted RBP18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 NEBLO76041 1014 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 BMP3P12645 472 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 ALDH3A1P30838 453 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 STAT3P40763 770 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 EARS2Q5JPH6 523 aaKnown RBP18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 CDKAL1Q5VV42 579 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 NBPF3Q9H094 633 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 IRX5P78411 483 aaPredicted RBP18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 TBC1D10BQ4KMP7 808 aaPredicted RBP18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 NT5DC1Q5TFE4 455 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 FBXO33Q7Z6M2 555 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 PARVGQ9HBI0 331 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 TRIM37O94972 964 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 KLRK1P26718 216 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 GPSM2P81274 684 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 TBX2Q13207 712 aaPredicted RBP18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 ITPK1Q13572 414 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 HNRNPLLQ8WVV9 542 aaKnown RBP18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 RIOK1Q9BRS2 568 aaKnown RBP18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 HOMER3Q9NSC5 361 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 DLATP10515 647 aaKnown RBP18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 PPP1R18Q6NYC8 613 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 DNAI2Q9GZS0 605 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 VIPAS39Q9H9C1 493 aa18.63■□□□□ 0.57
SMARCA4-215ENST00000590574 TESPA1A2RU30 521 aaPredicted RBP18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 POTEFA5A3E0 1075 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 PPIP5K2O43314 1243 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 POTEIP0CG38 1075 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 ALAS1P13196 640 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 STX2P32856 288 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 MXRA7P84157 204 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 PDXDC2PQ6P474 469 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 POTEGQ6S5H5 508 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 POTEEQ6S8J3 1075 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 RIN2Q8WYP3 895 aaPredicted RBP18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 UBE2TQ9NPD8 197 aaPredicted RBP18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 HPCAL4Q9UM19 191 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 PASKQ96RG2 1323 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 PIGOQ8TEQ8 1089 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 ARHGEF1Q92888 912 aaKnown RBP18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 CSRNP1Q96S65 589 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 MYMKA6NI61 221 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 ZBTB22O15209 634 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 FGGP02679 453 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 MS4A14Q96JA4 679 aa18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 FEZ2Q9UHY8 353 aaPredicted RBP18.62■□□□□ 0.57
SMARCA4-215ENST00000590574 DKC1O60832 514 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 NR3C1P04150 777 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 KRT15P19012 456 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 CACNB3P54284 484 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 MDM2Q00987 491 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 DCUN1D2Q6PH85 259 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 CCNI2Q6ZMN8 369 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 RSRC2Q7L4I2 434 aaKnown RBP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 LARGE2Q8N3Y3 721 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 NACC1Q96RE7 527 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 SMARCAL1Q9NZC9 954 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 MAD2L2Q9UI95 211 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 PLEKHG2Q9H7P9 1386 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 JCADQ9P266 1359 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 A0A087X0B3 334 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 IFNAR2P48551 515 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 DR1Q01658 176 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 CCDC93Q567U6 631 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 PI4KBQ9UBF8 816 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 NPHP3-ACAD11A0A0J9YXS1 232 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 ZBED4O75132 1171 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms