RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ZNF697Q5TEC3 545 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 NECAB1Q8N987 351 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 AFAP1L1Q8TED9 768 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 DHX38Q92620 1227 aaKnown RBP13.75□□□□□ -0.21
TPM4-212ENST00000590180 AIFM3Q96NN9 605 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 SMARCAD1Q9H4L7 1026 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 AZI2Q9H6S1 392 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 CXXC1Q9P0U4 656 aaPredicted RBP13.75□□□□□ -0.21
TPM4-212ENST00000590180 NFASCO94856 1347 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 GRXCR1A8MXD5 290 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 FAM86B1E9PN63 330 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 TREHO43280 583 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 PFKMP08237 780 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 FAM86B2P0C5J1 330 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 CKBP12277 381 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 ACTN1P12814 892 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 MARK3P27448 753 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 THPOP40225 353 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 ITGB3BPQ13352 177 aaPredicted RBP13.74□□□□□ -0.21
TPM4-212ENST00000590180 PRR16Q569H4 304 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 LRRC8DQ7L1W4 858 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 NIPA1Q7RTP0 329 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 BLIDQ8IZY5 108 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 ERAP1Q9NZ08 941 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 PCDHA4Q9UN74 947 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 SLC4A7Q9Y6M7 1214 aa13.74□□□□□ -0.21
TPM4-212ENST00000590180 TRIP12Q14669 1992 aaPredicted RBP13.74□□□□□ -0.21
TPM4-212ENST00000590180 XBP1P17861 261 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 STAT5BP51692 787 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 ACTR2P61160 394 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 ME3Q16798 604 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 ZNF618Q5T7W0 954 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 FAM109BQ6ICB4 259 aaPredicted RBP13.73□□□□□ -0.21
TPM4-212ENST00000590180 SERINC5Q86VE9 423 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 CRYGNQ8WXF5 182 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 WNT8BQ93098 351 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 VWCEQ96DN2 955 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 ZNF577Q9BSK1 485 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 SEMA6BQ9H3T3 888 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 MTMR10Q9NXD2 777 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 ORC3Q9UBD5 711 aaPredicted RBP13.73□□□□□ -0.21
TPM4-212ENST00000590180 KCNJ14Q9UNX9 436 aa13.73□□□□□ -0.21
TPM4-212ENST00000590180 NRCAMQ92823 1304 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 IGLV3-22A0A075B6J6 115 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 RSPH10B2B2RC85 870 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 IPO5O00410 1097 aaKnown RBP13.72□□□□□ -0.21
TPM4-212ENST00000590180 BACH1O14867 736 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 PARNO95453 639 aaKnown RBP13.72□□□□□ -0.21
TPM4-212ENST00000590180 RSPH10BP0C881 870 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 USP11P51784 963 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 IGBP1P78318 339 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 PPFIA1Q13136 1202 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 TRIM71Q2Q1W2 868 aaKnown RBP13.72□□□□□ -0.21
TPM4-212ENST00000590180 C8orf34Q49A92 452 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 GALNT17Q6IS24 598 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 WASF1Q92558 559 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 TBC1D22BQ9NU19 505 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 MSRAQ9UJ68 235 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
TPM4-212ENST00000590180 MYO9BQ13459 2157 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 LGR5O75473 907 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 LARGE1O95461 756 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 CTDNEP1O95476 244 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 CIITAP33076 1130 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 SETQ01105 290 aaPredicted RBP13.71□□□□□ -0.21
TPM4-212ENST00000590180 TBCKQ8TEA7 893 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 LMBR1Q8WVP7 490 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 TNPO1Q92973 898 aaKnown RBP13.71□□□□□ -0.21
TPM4-212ENST00000590180 TIFAQ96CG3 184 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 PCYT2Q99447 389 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 TCEAL9Q9UHQ7 104 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
TPM4-212ENST00000590180 LAMA3Q16787 3333 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 DHX15O43143 795 aaKnown RBP13.7□□□□□ -0.22
TPM4-212ENST00000590180 NBNO60934 754 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 ATG7O95352 703 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 CCNE2O96020 404 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 CTSHP09668 335 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 INSRRP14616 1297 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 ATP2A2P16615 1042 aaKnown RBP13.7□□□□□ -0.22
TPM4-212ENST00000590180 DNAJB2P25686 324 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 HOXC8P31273 242 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 PBX2P40425 430 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 RABGGTBP53611 331 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 RBL2Q08999 1139 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 GPNMBQ14956 572 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 RAB30Q15771 203 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 GRIK4Q16099 956 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 FAM160B1Q5W0V3 765 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 SWSAP1Q6NVH7 229 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 MIS18BP1Q6P0N0 1132 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 PLPPR4Q7Z2D5 763 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 FAM177A1Q8N128 213 aaPredicted RBP13.7□□□□□ -0.22
TPM4-212ENST00000590180 GTF3C6Q969F1 213 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 PHF20Q9BVI0 1012 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 PBX4Q9BYU1 374 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 GJB4Q9NTQ9 266 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms