RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 POTEBQ6S5H4 581 aa17.59■□□□□ 0.41
ACTN4-211ENST00000589528 PLEKHM2Q8IWE5 1019 aa17.59■□□□□ 0.41
ACTN4-211ENST00000589528 LMBR1Q8WVP7 490 aa17.59■□□□□ 0.41
ACTN4-211ENST00000589528 PIBF1Q8WXW3 757 aa17.59■□□□□ 0.41
ACTN4-211ENST00000589528 CUL5Q93034 780 aa17.59■□□□□ 0.41
ACTN4-211ENST00000589528 FBXL18Q96ME1 805 aa17.59■□□□□ 0.41
ACTN4-211ENST00000589528 INPP4AQ96PE3 977 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-211ENST00000589528 RWDD1Q9H446 243 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-211ENST00000589528 IGFLR1Q9H665 355 aa17.59■□□□□ 0.41
ACTN4-211ENST00000589528 NRCAMQ92823 1304 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 SPATA31C2B4DYI2 1134 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 IFIT3O14879 490 aaKnown RBP17.58■□□□□ 0.4
ACTN4-211ENST00000589528 ICAM3P32942 547 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 MRPS9P82933 396 aaKnown RBP17.58■□□□□ 0.4
ACTN4-211ENST00000589528 BTG3Q14201 252 aaPredicted RBP17.58■□□□□ 0.4
ACTN4-211ENST00000589528 GRM4Q14833 912 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 COL19A1Q14993 1142 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 FAM26DQ5JW98 314 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 SMARCC2Q8TAQ2 1214 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 PPP2R3CQ969Q6 453 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 MFSD14AQ96MC6 490 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 OSBPL3Q9H4L5 887 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 RIOX1Q9H6W3 641 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 TTC3P53804 2025 aa17.58■□□□□ 0.4
ACTN4-211ENST00000589528 C19orf67A6NJJ6 358 aa17.57■□□□□ 0.4
ACTN4-211ENST00000589528 GRM6O15303 877 aa17.57■□□□□ 0.4
ACTN4-211ENST00000589528 IRS1P35568 1242 aa17.57■□□□□ 0.4
ACTN4-211ENST00000589528 SART3Q15020 963 aaKnown RBP17.57■□□□□ 0.4
ACTN4-211ENST00000589528 SMAD2Q15796 467 aaKnown RBP17.57■□□□□ 0.4
ACTN4-211ENST00000589528 TAF2Q6P1X5 1199 aa17.57■□□□□ 0.4
ACTN4-211ENST00000589528 HFE2Q6ZVN8 426 aa17.57■□□□□ 0.4
ACTN4-211ENST00000589528 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
ACTN4-211ENST00000589528 NLRX1Q86UT6 975 aa17.57■□□□□ 0.4
ACTN4-211ENST00000589528 LOXHD1Q8IVV2 1947 aa17.57■□□□□ 0.4
ACTN4-211ENST00000589528 ZNF318Q5VUA4 2279 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 FRMPD4Q14CM0 1322 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 MBTPS2O43462 519 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 CHRNA1P02708 482 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 LTBRP36941 435 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 NDUFV1P49821 464 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 HYAL1Q12794 435 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 SEMA3FQ13275 785 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 SMAD4Q13485 552 aaKnown RBP17.56■□□□□ 0.4
ACTN4-211ENST00000589528 WTAPQ15007 396 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 RALYLQ86SE5 291 aaKnown RBP17.56■□□□□ 0.4
ACTN4-211ENST00000589528 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
ACTN4-211ENST00000589528 SENP7Q9BQF6 1050 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 MUTYHQ9UIF7 546 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 CD207Q9UJ71 328 aa17.56■□□□□ 0.4
ACTN4-211ENST00000589528 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
ACTN4-211ENST00000589528 STXBP3O00186 592 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 TCF7P36402 384 aaPredicted RBP17.55■□□□□ 0.4
ACTN4-211ENST00000589528 ADAM17P78536 824 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 PPFIA1Q13136 1202 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 CTC1Q2NKJ3 1217 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 PCNX4Q63HM2 1172 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 RUFY4Q6ZNE9 571 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 CATIPQ7Z7H3 387 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 CLP1Q92989 425 aaKnown RBP17.55■□□□□ 0.4
ACTN4-211ENST00000589528 PLVAPQ9BX97 442 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 TUBE1Q9UJT0 475 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 KIAA1671Q9BY89 1806 aa17.55■□□□□ 0.4
ACTN4-211ENST00000589528 TRIOO75962 3097 aa17.54■□□□□ 0.4
ACTN4-211ENST00000589528 CYTH3O43739 400 aa17.54■□□□□ 0.4
ACTN4-211ENST00000589528 MMP1P03956 469 aa17.54■□□□□ 0.4
ACTN4-211ENST00000589528 MARK3P27448 753 aa17.54■□□□□ 0.4
ACTN4-211ENST00000589528 DLX2Q07687 328 aaPredicted RBP17.54■□□□□ 0.4
ACTN4-211ENST00000589528 AAMPQ13685 434 aa17.54■□□□□ 0.4
ACTN4-211ENST00000589528 LPIN1Q14693 890 aa17.54■□□□□ 0.4
ACTN4-211ENST00000589528 XRRA1Q6P2D8 792 aa17.54■□□□□ 0.4
ACTN4-211ENST00000589528 RNF135Q8IUD6 432 aa17.54■□□□□ 0.4
ACTN4-211ENST00000589528 GLG1Q92896 1179 aa17.54■□□□□ 0.4
ACTN4-211ENST00000589528 ALG13Q9NP73 1137 aaKnown RBP17.54■□□□□ 0.4
ACTN4-211ENST00000589528 SEC63Q9UGP8 760 aaKnown RBP17.54■□□□□ 0.4
ACTN4-211ENST00000589528 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
ACTN4-211ENST00000589528 M0QZ92 97 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 ENPP3O14638 875 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 TBX10O75333 385 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 GTF2F1P35269 517 aaKnown RBP eCLIP17.53■□□□□ 0.43e-7■■■■■ 30.3
ACTN4-211ENST00000589528 NUCB1Q02818 461 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 GRIK4Q16099 956 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 SLC35G1Q2M3R5 365 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 HERC4Q5GLZ8 1057 aaPredicted RBP17.53■□□□□ 0.4
ACTN4-211ENST00000589528 TSHZ1Q6ZSZ6 1077 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 DNAJB3Q8WWF6 145 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 RRP36Q96EU6 259 aaKnown RBP17.53■□□□□ 0.4
ACTN4-211ENST00000589528 CDHR1Q96JP9 859 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 EHMT1Q9H9B1 1298 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 ERAP1Q9NZ08 941 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 TELO2Q9Y4R8 837 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 CDY2AQ9Y6F7 541 aa17.53■□□□□ 0.4
ACTN4-211ENST00000589528 TECTAO75443 2155 aa17.52■□□□□ 0.4
ACTN4-211ENST00000589528 IGBP1P78318 339 aa17.52■□□□□ 0.4
ACTN4-211ENST00000589528 FBXO47Q5MNV8 452 aa17.52■□□□□ 0.4
ACTN4-211ENST00000589528 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
ACTN4-211ENST00000589528 NCOA7Q8NI08 942 aa17.52■□□□□ 0.4
ACTN4-211ENST00000589528 CTCFLQ8NI51 663 aaPredicted RBP17.52■□□□□ 0.4
ACTN4-211ENST00000589528 SEPT1Q8WYJ6 367 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms