RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 BARHL2Q9NY43 387 aa11.67□□□□□ -0.54
APOC1-203ENST00000588802 A0A0C4DFX4 3053 aa11.67□□□□□ -0.54
APOC1-203ENST00000588802 ABCB11O95342 1321 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 SYCE3A1L190 88 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 KPNA6O60684 536 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 CFBP00751 764 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 EIF2AK2P19525 551 aaKnown RBP11.66□□□□□ -0.54
APOC1-203ENST00000588802 SMARCA1P28370 1054 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 MARCKSP29966 332 aaPredicted RBP11.66□□□□□ -0.54
APOC1-203ENST00000588802 DEKP35659 375 aaKnown RBP11.66□□□□□ -0.54
APOC1-203ENST00000588802 RABGGTBP53611 331 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 TTLL4Q14679 1199 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 BRDTQ58F21 947 aaPredicted RBP11.66□□□□□ -0.54
APOC1-203ENST00000588802 RASIP1Q5U651 963 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 ARHGEF16Q5VV41 709 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 FSIP1Q8NA03 581 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 DAGLBQ8NCG7 672 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 KCNG4Q8TDN1 519 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 ZFP91Q96JP5 570 aaPredicted RBP11.66□□□□□ -0.54
APOC1-203ENST00000588802 RMDN3Q96TC7 470 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 NKX2-4Q9H2Z4 354 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 PRDM12Q9H4Q4 367 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 PCDHA7Q9UN72 937 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 PCDHA4Q9UN74 947 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 MRPL11Q9Y3B7 192 aaKnown RBP11.66□□□□□ -0.54
APOC1-203ENST00000588802 PCDHB6Q9Y5E3 794 aa11.66□□□□□ -0.54
APOC1-203ENST00000588802 LAMA2P24043 3122 aaKnown RBP11.66□□□□□ -0.54
APOC1-203ENST00000588802 PPP1R11O60927 126 aaPredicted RBP11.65□□□□□ -0.54
APOC1-203ENST00000588802 SUPT20HL2P0C7V6 817 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 MYCLP12524 364 aaPredicted RBP11.65□□□□□ -0.54
APOC1-203ENST00000588802 EDNRBP24530 442 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 ZNF445P59923 1031 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 SLC39A14Q15043 492 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 RILPL1Q5EBL4 403 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 PIK3AP1Q6ZUJ8 805 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 GAS2L3Q86XJ1 694 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 MCF2L2Q86YR7 1114 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 AFG1LQ8WV93 481 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 HERVK_113Q902F9 699 aa11.65□□□□□ -0.54
APOC1-203ENST00000588802 COL25A1Q9BXS0 654 aaPredicted RBP11.65□□□□□ -0.54
APOC1-203ENST00000588802 NOL7Q9UMY1 257 aaKnown RBP11.65□□□□□ -0.54
APOC1-203ENST00000588802 MYH7BA7E2Y1 1941 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 hCG_1984214I3L0E3 225 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 NR1I2O75469 434 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 PFKMP08237 780 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 MYOGP15173 224 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 HOXA13P31271 388 aaPredicted RBP11.64□□□□□ -0.55
APOC1-203ENST00000588802 STXBP2Q15833 593 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 CCDC85BQ15834 202 aaPredicted RBP11.64□□□□□ -0.55
APOC1-203ENST00000588802 TTC38Q5R3I4 469 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 CCDC73Q6ZRK6 1079 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 RPUSD2Q8IZ73 545 aaKnown RBP11.64□□□□□ -0.55
APOC1-203ENST00000588802 ZNF713Q8N859 430 aaPredicted RBP11.64□□□□□ -0.55
APOC1-203ENST00000588802 NSUN6Q8TEA1 469 aaKnown RBP11.64□□□□□ -0.55
APOC1-203ENST00000588802 CCDC12Q8WUD4 166 aaPredicted RBP11.64□□□□□ -0.55
APOC1-203ENST00000588802 MRPS27Q92552 414 aaKnown RBP11.64□□□□□ -0.55
APOC1-203ENST00000588802 MTMR8Q96EF0 704 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 DACT1Q9NYF0 836 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 MSRAQ9UJ68 235 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 PCDHA6Q9UN73 950 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 NOD1Q9Y239 953 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 YBX2Q9Y2T7 364 aaKnown RBP11.64□□□□□ -0.55
APOC1-203ENST00000588802 PCDHA8Q9Y5H6 950 aa11.64□□□□□ -0.55
APOC1-203ENST00000588802 PNMA6FA0A0J9YX94 578 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 A0A1W2PQ27 194 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 A0A1W2PQ64 194 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 A0A1W2PQD8 194 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 FSD2A1L4K1 749 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 GOLGA6L3A6NEY3 463 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 SMCO2A6NFE2 343 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 A6NJR5 290 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 M0R2N6 131 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 ZBTB5O15062 677 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 PPP6R2O75170 966 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 GH1P01241 217 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 NR3C2P08235 984 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 IGFBP4P22692 258 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
APOC1-203ENST00000588802 ARHGAP1Q07960 439 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 RAB30Q15771 203 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
APOC1-203ENST00000588802 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 CCDC62Q6P9F0 684 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 FCHSD1Q86WN1 690 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 SAMD3Q8N6K7 520 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 USP38Q8NB14 1042 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 RETREG2Q8NC44 543 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 AMNQ9BXJ7 453 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 ZMYND12Q9H0C1 365 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 NUP62CLQ9H1M0 184 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 CLSTN2Q9H4D0 955 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 PRDM6Q9NQX0 595 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.63□□□□□ -0.55
APOC1-203ENST00000588802 DDX19AQ9NUU7 478 aaKnown RBP11.63□□□□□ -0.55
APOC1-203ENST00000588802 PCDHA1Q9Y5I3 950 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 MRVI1Q9Y6F6 885 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
APOC1-203ENST00000588802 CCDC194A0A1B0GVG4 234 aa11.62□□□□□ -0.55
APOC1-203ENST00000588802 A0A1B0GVL5 298 aa11.62□□□□□ -0.55
APOC1-203ENST00000588802 ESYT2A0FGR8 921 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms