RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 BICD2Q8TD16 824 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 SLC9A7Q96T83 725 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 SLC26A6Q9BXS9 759 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 RNPEPQ9H4A4 650 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 ZNF576Q9H609 170 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 EMSYQ7Z589 1322 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 NRCAMQ92823 1304 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 MEIS1O00470 390 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 CXCL10P02778 98 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 ATP2A2P16615 1042 aaKnown RBP16.48■□□□□ 0.23
DDX39A-208ENST00000588692 PBX2P40425 430 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 CCT2P78371 535 aaKnown RBP16.48■□□□□ 0.23
DDX39A-208ENST00000588692 JAKMIP3Q5VZ66 844 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 PHOSPHO2Q8TCD6 241 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 SDF4Q9BRK5 362 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 NCOA5Q9HCD5 579 aaKnown RBP16.48■□□□□ 0.23
DDX39A-208ENST00000588692 SH3GLB2Q9NR46 395 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 ERAP1Q9NZ08 941 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 SLC9A2Q9UBY0 812 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 PCDHA11Q9Y5I1 949 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 GSTTP1A0A1W2PQM5 241 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 CPLX1O14810 134 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 CYP3A4P08684 503 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 ZNF76P36508 570 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 ZNF618Q5T7W0 954 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 CNKSR3Q6P9H4 555 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 CPLX2Q6PUV4 134 aaKnown RBP16.47■□□□□ 0.23
DDX39A-208ENST00000588692 TRAF7Q6Q0C0 670 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 CYP2W1Q8TAV3 490 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 CRYGNQ8WXF5 182 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 WNT8BQ93098 351 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 SMARCAD1Q9H4L7 1026 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 TELO2Q9Y4R8 837 aa16.47■□□□□ 0.23
DDX39A-208ENST00000588692 TREHO43280 583 aa16.46■□□□□ 0.23
DDX39A-208ENST00000588692 NBNO60934 754 aa16.46■□□□□ 0.23
DDX39A-208ENST00000588692 THPOP40225 353 aa16.46■□□□□ 0.23
DDX39A-208ENST00000588692 KCNJ6P48051 423 aa16.46■□□□□ 0.23
DDX39A-208ENST00000588692 GPNMBQ14956 572 aa16.46■□□□□ 0.23
DDX39A-208ENST00000588692 FAM177A1Q8N128 213 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-208ENST00000588692 LMBR1Q8WVP7 490 aa16.46■□□□□ 0.23
DDX39A-208ENST00000588692 GLG1Q92896 1179 aa16.46■□□□□ 0.23
DDX39A-208ENST00000588692 SLC28A3Q9HAS3 691 aa16.46■□□□□ 0.23
DDX39A-208ENST00000588692 AGO4Q9HCK5 861 aaKnown RBP16.46■□□□□ 0.23
DDX39A-208ENST00000588692 SETD4Q9NVD3 440 aa16.46■□□□□ 0.23
DDX39A-208ENST00000588692 CHD9Q3L8U1 2897 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 RSPH10B2B2RC85 870 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 EFCAB14O75071 495 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 LGR5O75473 907 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 DEXIO95424 95 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 RSPH10BP0C881 870 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 ARP10275 920 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 ADAM17P78536 824 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-208ENST00000588692 SSRP1Q08945 709 aaKnown RBP16.45■□□□□ 0.22
DDX39A-208ENST00000588692 GRIN2CQ14957 1233 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 MYLIPQ8WY64 445 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 TNPO1Q92973 898 aaKnown RBP16.45■□□□□ 0.22
DDX39A-208ENST00000588692 AZI2Q9H6S1 392 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 CDH23Q9H251 3354 aa16.45■□□□□ 0.22
DDX39A-208ENST00000588692 PTPRSQ13332 1948 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 ABHD14A-ACY1A0A1B0GW23 586 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 CDKL5O76039 1030 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 FOSL2P15408 326 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 ACTR2P61160 394 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 PPFIA1Q13136 1202 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 ITGB3BPQ13352 177 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-208ENST00000588692 TAF2Q6P1X5 1199 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 PLA2G4DQ86XP0 818 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 IL17RAQ96F46 866 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 NKX2-4Q9H2Z4 354 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 VPS54Q9P1Q0 977 aa16.44■□□□□ 0.22
DDX39A-208ENST00000588692 YBX2Q9Y2T7 364 aaKnown RBP16.44■□□□□ 0.22
DDX39A-208ENST00000588692 IGLV3-22A0A075B6J6 115 aa16.43■□□□□ 0.22
DDX39A-208ENST00000588692 FAM86B1E9PN63 330 aa16.43■□□□□ 0.22
DDX39A-208ENST00000588692 PPFIA3O75145 1194 aa16.43■□□□□ 0.22
DDX39A-208ENST00000588692 FAM86B2P0C5J1 330 aa16.43■□□□□ 0.22
DDX39A-208ENST00000588692 RABGGTBP53611 331 aa16.43■□□□□ 0.22
DDX39A-208ENST00000588692 WDR5P61964 334 aaKnown RBP16.43■□□□□ 0.22
DDX39A-208ENST00000588692 MBTPS1Q14703 1052 aa16.43■□□□□ 0.22
DDX39A-208ENST00000588692 ANKRD1Q15327 319 aa16.43■□□□□ 0.22
DDX39A-208ENST00000588692 HERC6Q8IVU3 1022 aa16.43■□□□□ 0.22
DDX39A-208ENST00000588692 SLC17A8Q8NDX2 589 aa16.43■□□□□ 0.22
DDX39A-208ENST00000588692 KIF28PB7ZC32 967 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 ADAMTS3O15072 1205 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 ATG7O95352 703 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 RPLP2P05387 115 aaKnown RBP16.42■□□□□ 0.22
DDX39A-208ENST00000588692 MARK3P27448 753 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 CIITAP33076 1130 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 SLC26A2P50443 739 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 NLRP5P59047 1200 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 STK3Q13188 491 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 IKBKEQ14164 716 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 GRIK4Q16099 956 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 PPP2R2DQ66LE6 453 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 PLPPR4Q7Z2D5 763 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 RPAINQ86UA6 219 aa16.42■□□□□ 0.22
DDX39A-208ENST00000588692 MAFAQ8NHW3 353 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-208ENST00000588692 PCYT2Q99447 389 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms