RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 ADGRA3Q8IWK6 1321 aa17.71■□□□□ 0.42
IFT20-216ENST00000588477 STXBP3O00186 592 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 LINC01565O15544 149 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 TBX10O75333 385 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 CHRNA1P02708 482 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 ADAM17P78536 824 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 MRPS9P82933 396 aaKnown RBP17.7■□□□□ 0.42
IFT20-216ENST00000588477 NEDD9Q14511 834 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 GNPTABQ3T906 1256 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 UTP14CQ5TAP6 766 aaKnown RBP17.7■□□□□ 0.42
IFT20-216ENST00000588477 TRIM50Q86XT4 487 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 PIGSQ96S52 555 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 PHOX2BQ99453 314 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 GPR20Q99678 358 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 ALG13Q9NP73 1137 aaKnown RBP17.7■□□□□ 0.42
IFT20-216ENST00000588477 RTEL1Q9NZ71 1219 aa17.7■□□□□ 0.42
IFT20-216ENST00000588477 GHRP10912 638 aa17.69■□□□□ 0.42
IFT20-216ENST00000588477 ICAM3P32942 547 aa17.69■□□□□ 0.42
IFT20-216ENST00000588477 SMAD4Q13485 552 aaKnown RBP17.69■□□□□ 0.42
IFT20-216ENST00000588477 BTG3Q14201 252 aaPredicted RBP17.69■□□□□ 0.42
IFT20-216ENST00000588477 IMMTQ16891 758 aaKnown RBP17.69■□□□□ 0.42
IFT20-216ENST00000588477 METTL7BQ6UX53 244 aa17.69■□□□□ 0.42
IFT20-216ENST00000588477 LMBR1Q8WVP7 490 aa17.69■□□□□ 0.42
IFT20-216ENST00000588477 EDAQ92838 391 aa17.69■□□□□ 0.42
IFT20-216ENST00000588477 CLP1Q92989 425 aaKnown RBP17.69■□□□□ 0.42
IFT20-216ENST00000588477 LNPKQ9C0E8 428 aa17.69■□□□□ 0.42
IFT20-216ENST00000588477 RC3H2Q9HBD1 1191 aaKnown RBP17.69■□□□□ 0.42
IFT20-216ENST00000588477 CD207Q9UJ71 328 aa17.69■□□□□ 0.42
IFT20-216ENST00000588477 ZNF215Q9UL58 517 aaPredicted RBP17.69■□□□□ 0.42
IFT20-216ENST00000588477 TELO2Q9Y4R8 837 aa17.69■□□□□ 0.42
IFT20-216ENST00000588477 USP34Q70CQ2 3546 aa17.68■□□□□ 0.42
IFT20-216ENST00000588477 PALM3A6NDB9 673 aaPredicted RBP17.68■□□□□ 0.42
IFT20-216ENST00000588477 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
IFT20-216ENST00000588477 ENPP3O14638 875 aa17.68■□□□□ 0.42
IFT20-216ENST00000588477 SP4Q02446 784 aa17.68■□□□□ 0.42
IFT20-216ENST00000588477 SEMA3FQ13275 785 aa17.68■□□□□ 0.42
IFT20-216ENST00000588477 ADAM15Q13444 863 aa17.68■□□□□ 0.42
IFT20-216ENST00000588477 ZNF689Q96CS4 500 aaPredicted RBP17.68■□□□□ 0.42
IFT20-216ENST00000588477 CNNM2Q9H8M5 875 aa17.68■□□□□ 0.42
IFT20-216ENST00000588477 EHMT1Q9H9B1 1298 aa17.68■□□□□ 0.42
IFT20-216ENST00000588477 STAM2O75886 525 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 MMP1P03956 469 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 NDUFV1P49821 464 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 TRAF1Q13077 416 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 SEC23AQ15436 765 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 SLC35G1Q2M3R5 365 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 RUFY4Q6ZNE9 571 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 PRSS33Q8NF86 280 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 INPP4AQ96PE3 977 aaPredicted RBP17.67■□□□□ 0.42
IFT20-216ENST00000588477 DSCC1Q9BVC3 393 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 RIOX1Q9H6W3 641 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 NRCAMQ92823 1304 aa17.67■□□□□ 0.42
IFT20-216ENST00000588477 FNDC1Q4ZHG4 1894 aaPredicted RBP17.67■□□□□ 0.42
IFT20-216ENST00000588477 FIBPO43427 364 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 MGAT3Q09327 533 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 CAMK1Q14012 370 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 LPIN1Q14693 890 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 IER5LQ5T953 404 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 CYB5R4Q7L1T6 521 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 BMP8AQ7Z5Y6 402 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 PBXIP1Q96AQ6 731 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 MSLNLQ96KJ4 702 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 SNX27Q96L92 541 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 PLVAPQ9BX97 442 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 DIAPH3Q9NSV4 1193 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 PLAGL2Q9UPG8 496 aa17.66■□□□□ 0.42
IFT20-216ENST00000588477 DGKIO75912 1065 aa17.65■□□□□ 0.42
IFT20-216ENST00000588477 HDAC1Q13547 482 aaPredicted RBP17.65■□□□□ 0.42
IFT20-216ENST00000588477 TRIM67Q6ZTA4 783 aa17.65■□□□□ 0.42
IFT20-216ENST00000588477 ADGRD2Q7Z7M1 963 aa17.65■□□□□ 0.42
IFT20-216ENST00000588477 P2RX5Q93086 422 aa17.65■□□□□ 0.42
IFT20-216ENST00000588477 FRMPD4Q14CM0 1322 aa17.65■□□□□ 0.42
IFT20-216ENST00000588477 PNMA6FA0A0J9YX94 578 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 TMEM221A6NGB7 291 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 M0R296 226 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 CYTH3O43739 400 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 EYA4O95677 639 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 DNAJB1P25685 340 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 GRM4Q14833 912 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 TAF2Q6P1X5 1199 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 RSPH3Q86UC2 560 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 DNAJB3Q8WWF6 145 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 PPP2R3CQ969Q6 453 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 EVPLQ92817 2033 aa17.64■□□□□ 0.41
IFT20-216ENST00000588477 ITGB1P05556 798 aa17.63■□□□□ 0.41
IFT20-216ENST00000588477 TCF7P36402 384 aaPredicted RBP17.63■□□□□ 0.41
IFT20-216ENST00000588477 PTPN5P54829 565 aa17.63■□□□□ 0.41
IFT20-216ENST00000588477 RRP1P56182 461 aaKnown RBP17.63■□□□□ 0.41
IFT20-216ENST00000588477 FBXO47Q5MNV8 452 aa17.63■□□□□ 0.41
IFT20-216ENST00000588477 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
IFT20-216ENST00000588477 SPPL3Q8TCT6 385 aa17.63■□□□□ 0.41
IFT20-216ENST00000588477 PIBF1Q8WXW3 757 aa17.63■□□□□ 0.41
IFT20-216ENST00000588477 SENP7Q9BQF6 1050 aa17.63■□□□□ 0.41
IFT20-216ENST00000588477 CLEC1BQ9P126 229 aa17.63■□□□□ 0.41
IFT20-216ENST00000588477 CDY2AQ9Y6F7 541 aa17.63■□□□□ 0.41
IFT20-216ENST00000588477 MRPL42Q9Y6G3 142 aaKnown RBP17.63■□□□□ 0.41
IFT20-216ENST00000588477 LOC730098B7Z3J9 87 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 HIP1O00291 1037 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 MARK3P27448 753 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 ZXDAP98168 799 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms