RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 BANK1Q8NDB2 785 aa16.2■□□□□ 0.18
DNMT1-213ENST00000587604 CTCFLQ8NI51 663 aaPredicted RBP16.2■□□□□ 0.18
DNMT1-213ENST00000587604 NEK9Q8TD19 979 aa16.2■□□□□ 0.18
DNMT1-213ENST00000587604 LMBR1Q8WVP7 490 aa16.2■□□□□ 0.18
DNMT1-213ENST00000587604 RRP36Q96EU6 259 aaKnown RBP16.2■□□□□ 0.18
DNMT1-213ENST00000587604 SPZ1Q9BXG8 430 aa16.2■□□□□ 0.18
DNMT1-213ENST00000587604 IFIH1Q9BYX4 1025 aaKnown RBP16.2■□□□□ 0.18
DNMT1-213ENST00000587604 C11orf16Q9NQ32 467 aa16.2■□□□□ 0.18
DNMT1-213ENST00000587604 TELO2Q9Y4R8 837 aa16.2■□□□□ 0.18
DNMT1-213ENST00000587604 MUC6Q6W4X9 2439 aa16.2■□□□□ 0.18
DNMT1-213ENST00000587604 RALGAPA2Q2PPJ7 1873 aa16.19■□□□□ 0.18
DNMT1-213ENST00000587604 COL4A6Q14031 1691 aa16.19■□□□□ 0.18
DNMT1-213ENST00000587604 GRXCR2A6NFK2 248 aa16.19■□□□□ 0.18
DNMT1-213ENST00000587604 KIF5BP33176 963 aa16.19■□□□□ 0.18
DNMT1-213ENST00000587604 ANTXR2P58335 489 aa16.19■□□□□ 0.18
DNMT1-213ENST00000587604 RPAINQ86UA6 219 aa16.19■□□□□ 0.18
DNMT1-213ENST00000587604 MB21D2Q8IYB1 491 aaPredicted RBP16.19■□□□□ 0.18
DNMT1-213ENST00000587604 GJD3Q8N144 294 aa16.19■□□□□ 0.18
DNMT1-213ENST00000587604 MAP4K1Q92918 833 aa16.19■□□□□ 0.18
DNMT1-213ENST00000587604 LZTS2Q9BRK4 669 aa16.19■□□□□ 0.18
DNMT1-213ENST00000587604 PIEZO1Q92508 2521 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 TTC3P53804 2025 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 SGSM2O43147 1006 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 DDAH1O94760 285 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 CHRNA1P02708 482 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 IL9P15248 144 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 SP4Q02446 784 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 TAF2Q6P1X5 1199 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 ZNF654Q8IZM8 581 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 IL17RAQ96F46 866 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 CDHR1Q96JP9 859 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 MTA3Q9BTC8 594 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 EHMT1Q9H9B1 1298 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 LY9Q9HBG7 655 aa16.18■□□□□ 0.18
DNMT1-213ENST00000587604 SEC63Q9UGP8 760 aaKnown RBP16.18■□□□□ 0.18
DNMT1-213ENST00000587604 ATP9AO75110 1047 aa16.17■□□□□ 0.18
DNMT1-213ENST00000587604 TCF7P36402 384 aaPredicted RBP16.17■□□□□ 0.18
DNMT1-213ENST00000587604 GNAQP50148 359 aa16.17■□□□□ 0.18
DNMT1-213ENST00000587604 TCEAL5Q5H9L2 206 aa16.17■□□□□ 0.18
DNMT1-213ENST00000587604 TMTC2Q8N394 836 aa16.17■□□□□ 0.18
DNMT1-213ENST00000587604 FIBCD1Q8N539 461 aa16.17■□□□□ 0.18
DNMT1-213ENST00000587604 SEPT1Q8WYJ6 367 aa16.17■□□□□ 0.18
DNMT1-213ENST00000587604 GPRASP2Q96D09 838 aa16.17■□□□□ 0.18
DNMT1-213ENST00000587604 PABPC5Q96DU9 382 aaKnown RBP16.17■□□□□ 0.18
DNMT1-213ENST00000587604 YTHDC1Q96MU7 727 aaKnown RBP16.17■□□□□ 0.18
DNMT1-213ENST00000587604 MYL10Q9BUA6 226 aa16.17■□□□□ 0.18
DNMT1-213ENST00000587604 NSUN3Q9H649 340 aaKnown RBP16.17■□□□□ 0.18
DNMT1-213ENST00000587604 PSTPIP2Q9H939 334 aa16.17■□□□□ 0.18
DNMT1-213ENST00000587604 FAM86C2PA6NEL3 165 aa16.16■□□□□ 0.18
DNMT1-213ENST00000587604 H3BQ06 376 aaPredicted RBP16.16■□□□□ 0.18
DNMT1-213ENST00000587604 RB1P06400 928 aa16.16■□□□□ 0.18
DNMT1-213ENST00000587604 KCNA2P16389 499 aa16.16■□□□□ 0.18
DNMT1-213ENST00000587604 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
DNMT1-213ENST00000587604 SSTR3P32745 418 aaPredicted RBP16.16■□□□□ 0.18
DNMT1-213ENST00000587604 COL19A1Q14993 1142 aa16.16■□□□□ 0.18
DNMT1-213ENST00000587604 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
DNMT1-213ENST00000587604 RUFY4Q6ZNE9 571 aa16.16■□□□□ 0.18
DNMT1-213ENST00000587604 RSPH3Q86UC2 560 aa16.16■□□□□ 0.18
DNMT1-213ENST00000587604 ERAP1Q9NZ08 941 aa16.16■□□□□ 0.18
DNMT1-213ENST00000587604 GSTTP1A0A1W2PQM5 241 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 C5orf67F2Z3F1 127 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 ENPP3O14638 875 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 NCK2O43639 380 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 GHRP10912 638 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 ALADP13716 330 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 ITGB5P18084 799 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 BMPR1AP36894 532 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 MGAT3Q09327 533 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 PPFIA1Q13136 1202 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 LPIN1Q14693 890 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 SRBD1Q8N5C6 995 aaKnown RBP16.15■□□□□ 0.18
DNMT1-213ENST00000587604 FAM50BQ9Y247 325 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 RWDD3Q9Y3V2 267 aa16.15■□□□□ 0.18
DNMT1-213ENST00000587604 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
DNMT1-213ENST00000587604 RBM8AQ9Y5S9 174 aaKnown RBP16.15■□□□□ 0.18
DNMT1-213ENST00000587604 MBLAC1A4D2B0 266 aaPredicted RBP16.14■□□□□ 0.17
DNMT1-213ENST00000587604 PRR33A8MZF0 331 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 MAFGO15525 162 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 PRC1O43663 620 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 MCM5P33992 734 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 CTNNB1P35222 781 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 GRIK4Q16099 956 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 MARCH8Q5T0T0 291 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 GLG1Q92896 1179 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 C11orf84Q9BUA3 381 aaPredicted RBP16.14■□□□□ 0.17
DNMT1-213ENST00000587604 LMAN2LQ9H0V9 348 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 SMARCAD1Q9H4L7 1026 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 TUBE1Q9UJT0 475 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 UBIAD1Q9Y5Z9 338 aa16.14■□□□□ 0.17
DNMT1-213ENST00000587604 CCDC69A6NI79 296 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 RPLP2P05387 115 aaKnown RBP16.13■□□□□ 0.17
DNMT1-213ENST00000587604 LINC00271P0C7V0 271 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 CALM1P0DP23 149 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 CALM2P0DP24 149 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 CALM3P0DP25 149 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 MARK3P27448 753 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 LIFRP42702 1097 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms