RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 RAB30Q15771 203 aa23.06■■□□□ 1.28
VAT1-203ENST00000587062 RNPEPQ9H4A4 650 aa23.06■■□□□ 1.28
VAT1-203ENST00000587062 PPFIA3O75145 1194 aa23.05■■□□□ 1.28
VAT1-203ENST00000587062 CKBP12277 381 aa23.05■■□□□ 1.28
VAT1-203ENST00000587062 RASIP1Q5U651 963 aa23.05■■□□□ 1.28
VAT1-203ENST00000587062 AGO4Q9HCK5 861 aaKnown RBP23.05■■□□□ 1.28
VAT1-203ENST00000587062 TBC1D22BQ9NU19 505 aa23.05■■□□□ 1.28
VAT1-203ENST00000587062 MTMR10Q9NXD2 777 aa23.05■■□□□ 1.28
VAT1-203ENST00000587062 EMSYQ7Z589 1322 aa23.05■■□□□ 1.28
VAT1-203ENST00000587062 PFKFB2O60825 505 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 CAND2O75155 1236 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 ARP10275 920 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 NEK4P51957 841 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 AK2P54819 239 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 Q7L0L9 218 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 SERINC5Q86VE9 423 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 CYP2W1Q8TAV3 490 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 IL17RAQ96F46 866 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 PCDHA4Q9UN74 947 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 DOCK5Q9H7D0 1870 aa23.04■■□□□ 1.28
VAT1-203ENST00000587062 GSTTP1A0A1W2PQM5 241 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 BAIAP3O94812 1187 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 RPLP2P05387 115 aaKnown RBP23.03■■□□□ 1.28
VAT1-203ENST00000587062 DNAJB2P25686 324 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 THPOP40225 353 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 SLC26A2P50443 739 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 USP11P51784 963 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 SCRN1Q12765 414 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 RSPH3Q86UC2 560 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 ZNF577Q9BSK1 485 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 SETD4Q9NVD3 440 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 TPCN1Q9ULQ1 816 aa23.03■■□□□ 1.28
VAT1-203ENST00000587062 RRN3P2A6NIE6 340 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 KIF28PB7ZC32 967 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 IPO5O00410 1097 aaKnown RBP23.02■■□□□ 1.28
VAT1-203ENST00000587062 EFCAB14O75071 495 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 KCNJ6P48051 423 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 ACTR2P61160 394 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 ZNF200P98182 395 aaPredicted RBP23.02■■□□□ 1.28
VAT1-203ENST00000587062 FAM160B1Q5W0V3 765 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 TRIM50Q86XT4 487 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 BLIDQ8IZY5 108 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 CTAGE1Q96RT6 745 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 SEMA6BQ9H3T3 888 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 STK36Q9NRP7 1315 aa23.02■■□□□ 1.28
VAT1-203ENST00000587062 TRIP12Q14669 1992 aaPredicted RBP23.01■■□□□ 1.27
VAT1-203ENST00000587062 KAT6AQ92794 2004 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 RSPH10B2B2RC85 870 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 TREHO43280 583 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 RSPH10BP0C881 870 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 ATP2A2P16615 1042 aaKnown RBP23.01■■□□□ 1.27
VAT1-203ENST00000587062 HOXC8P31273 242 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 STAT5BP51692 787 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 PPFIA1Q13136 1202 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 MIS18BP1Q6P0N0 1132 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 TAF2Q6P1X5 1199 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 PLPPR4Q7Z2D5 763 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 PHOSPHO2Q8TCD6 241 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 DHX38Q92620 1227 aaKnown RBP23.01■■□□□ 1.27
VAT1-203ENST00000587062 TIFAQ96CG3 184 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 FAM161BQ96MY7 647 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 SLC9A7Q96T83 725 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 STXBP5LQ9Y2K9 1186 aa23.01■■□□□ 1.27
VAT1-203ENST00000587062 FAM86B1E9PN63 330 aa23■■□□□ 1.27
VAT1-203ENST00000587062 BACH1O14867 736 aa23■■□□□ 1.27
VAT1-203ENST00000587062 LGR5O75473 907 aa23■■□□□ 1.27
VAT1-203ENST00000587062 FAM86B2P0C5J1 330 aa23■■□□□ 1.27
VAT1-203ENST00000587062 CIITAP33076 1130 aa23■■□□□ 1.27
VAT1-203ENST00000587062 IKBKEQ14164 716 aa23■■□□□ 1.27
VAT1-203ENST00000587062 PRR16Q569H4 304 aa23■■□□□ 1.27
VAT1-203ENST00000587062 ZNF618Q5T7W0 954 aa23■■□□□ 1.27
VAT1-203ENST00000587062 CNKSR3Q6P9H4 555 aa23■■□□□ 1.27
VAT1-203ENST00000587062 DAGLBQ8NCG7 672 aa23■■□□□ 1.27
VAT1-203ENST00000587062 RASGRP4Q8TDF6 673 aa23■■□□□ 1.27
VAT1-203ENST00000587062 CRYGNQ8WXF5 182 aa23■■□□□ 1.27
VAT1-203ENST00000587062 BRMS1Q9HCU9 246 aa23■■□□□ 1.27
VAT1-203ENST00000587062 CXXC1Q9P0U4 656 aaPredicted RBP23■■□□□ 1.27
VAT1-203ENST00000587062 TRPC6Q9Y210 931 aa23■■□□□ 1.27
VAT1-203ENST00000587062 TANC1Q9C0D5 1861 aa23■■□□□ 1.27
VAT1-203ENST00000587062 DDX39AO00148 427 aaKnown RBP22.99■■□□□ 1.27
VAT1-203ENST00000587062 MARK3P27448 753 aa22.99■■□□□ 1.27
VAT1-203ENST00000587062 KRT25Q7Z3Z0 450 aa22.99■■□□□ 1.27
VAT1-203ENST00000587062 PBX4Q9BYU1 374 aa22.99■■□□□ 1.27
VAT1-203ENST00000587062 SLC28A3Q9HAS3 691 aa22.99■■□□□ 1.27
VAT1-203ENST00000587062 UPF2Q9HAU5 1272 aaKnown RBP22.99■■□□□ 1.27
VAT1-203ENST00000587062 IGLV3-22A0A075B6J6 115 aa22.98■■□□□ 1.27
VAT1-203ENST00000587062 ABHD14A-ACY1A0A1B0GW23 586 aa22.98■■□□□ 1.27
VAT1-203ENST00000587062 ATG7O95352 703 aa22.98■■□□□ 1.27
VAT1-203ENST00000587062 CXCL10P02778 98 aa22.98■■□□□ 1.27
VAT1-203ENST00000587062 KRT76Q01546 638 aa22.98■■□□□ 1.27
VAT1-203ENST00000587062 ITGB3BPQ13352 177 aaPredicted RBP22.98■■□□□ 1.27
VAT1-203ENST00000587062 NONOQ15233 471 aaKnown RBP eCLIP22.98■■□□□ 1.272e-6■■■■□ 22.7
VAT1-203ENST00000587062 GRIK4Q16099 956 aa22.98■■□□□ 1.27
VAT1-203ENST00000587062 TRIM71Q2Q1W2 868 aaKnown RBP22.98■■□□□ 1.27
VAT1-203ENST00000587062 ZNF746Q6NUN9 644 aaPredicted RBP22.98■■□□□ 1.27
VAT1-203ENST00000587062 SMAP1Q8IYB5 467 aaPredicted RBP22.98■■□□□ 1.27
VAT1-203ENST00000587062 TBCKQ8TEA7 893 aa22.98■■□□□ 1.27
VAT1-203ENST00000587062 LMBR1Q8WVP7 490 aa22.98■■□□□ 1.27
VAT1-203ENST00000587062 ORC3Q9UBD5 711 aaPredicted RBP22.98■■□□□ 1.27
VAT1-203ENST00000587062 CCDC194A0A1B0GVG4 234 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms