RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 AGO4Q9HCK5 861 aaKnown RBP14.24□□□□□ -0.13
VMP1-202ENST00000585847 KCNH7Q9NS40 1196 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 TCHHQ07283 1943 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 MYADML2A6NDP7 307 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 MSH4O15457 936 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 CCNT1O60563 726 aaKnown RBP14.23□□□□□ -0.13
VMP1-202ENST00000585847 ADAMTS4O75173 837 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 FARP2O94887 1054 aaPredicted RBP14.23□□□□□ -0.13
VMP1-202ENST00000585847 TXNP10599 105 aaKnown RBP14.23□□□□□ -0.13
VMP1-202ENST00000585847 CNGA1P29973 690 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 ZNF76P36508 570 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 ARHGAP1Q07960 439 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 PTGDRQ13258 359 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 MTMR1Q13613 665 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 TTLL4Q14679 1199 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 GSE1Q14687 1217 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 ZSCAN23Q3MJ62 389 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 PRR16Q569H4 304 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 RBM43Q6ZSC3 357 aaKnown RBP14.23□□□□□ -0.13
VMP1-202ENST00000585847 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 FMR1NBQ8N0W7 255 aaPredicted RBP14.23□□□□□ -0.13
VMP1-202ENST00000585847 ENGASEQ8NFI3 743 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 ETNPPLQ8TBG4 499 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 HAS1Q92839 578 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 FTOQ9C0B1 505 aaKnown RBP eCLIP14.23□□□□□ -0.13
VMP1-202ENST00000585847 CRISPLD2Q9H0B8 497 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 UPF3AQ9H1J1 476 aaKnown RBP14.23□□□□□ -0.13
VMP1-202ENST00000585847 CUEDC2Q9H467 287 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 KCNMB3Q9NPA1 279 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 DACT1Q9NYF0 836 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 MRVI1Q9Y6F6 885 aa14.23□□□□□ -0.13
VMP1-202ENST00000585847 MAFGO15525 162 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 DUSP11O75319 330 aaKnown RBP14.22□□□□□ -0.13
VMP1-202ENST00000585847 MYL1P05976 194 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 TGFB3P10600 412 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 ATP2B1P20020 1258 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 SYKP43405 635 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 MNX1P50219 401 aaPredicted RBP14.22□□□□□ -0.13
VMP1-202ENST00000585847 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
VMP1-202ENST00000585847 PDIA5Q14554 519 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 ZNF174Q15697 407 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 CELF3Q5SZQ8 465 aaKnown RBP14.22□□□□□ -0.13
VMP1-202ENST00000585847 B3GNT9Q6UX72 402 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 KLHDC9Q8NEP7 349 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 U2AF1L4Q8WU68 220 aaKnown RBP14.22□□□□□ -0.13
VMP1-202ENST00000585847 SLC5A5Q92911 643 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 CHAMP1Q96JM3 812 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 FAM20AQ96MK3 541 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 SENP7Q9BQF6 1050 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 GTPBP4Q9BZE4 634 aaKnown RBP14.22□□□□□ -0.13
VMP1-202ENST00000585847 TNMDQ9H2S6 317 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 DDX25Q9UHL0 483 aaKnown RBP14.22□□□□□ -0.13
VMP1-202ENST00000585847 KCNH3Q9ULD8 1083 aa14.22□□□□□ -0.13
VMP1-202ENST00000585847 SYNRGQ9UMZ2 1314 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 NKRFO15226 690 aaKnown RBP eCLIP14.21□□□□□ -0.13
VMP1-202ENST00000585847 EVI5O60447 810 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 SORBS3O60504 671 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 GGPS1O95749 300 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 TFRCP02786 760 aaKnown RBP14.21□□□□□ -0.13
VMP1-202ENST00000585847 PFKFB1P16118 471 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 MCM7P33993 719 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 GJA9P57773 515 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 CALCRLQ16602 461 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 GNPTABQ3T906 1256 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 CCSAPQ6IQ19 270 aaPredicted RBP14.21□□□□□ -0.13
VMP1-202ENST00000585847 KCNV1Q6PIU1 500 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 DEFB118Q96PH6 123 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 MTMR9Q96QG7 549 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 PKD2L1Q9P0L9 805 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 TMEM63CQ9P1W3 806 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 OGDHLQ9ULD0 1010 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 Q9Y3F1 56 aa14.21□□□□□ -0.13
VMP1-202ENST00000585847 NFASCO94856 1347 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 DYNC1LI2O43237 492 aaPredicted RBP14.2□□□□□ -0.14
VMP1-202ENST00000585847 PSMD10O75832 226 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 SGPL1O95470 568 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 PGK1P00558 417 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 RARBP10826 455 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 MARCKSP29966 332 aaPredicted RBP14.2□□□□□ -0.14
VMP1-202ENST00000585847 ZRSR1Q15695 479 aaKnown RBP14.2□□□□□ -0.14
VMP1-202ENST00000585847 HSDL1Q3SXM5 330 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 L1TD1Q5T7N2 865 aaKnown RBP14.2□□□□□ -0.14
VMP1-202ENST00000585847 SHC4Q6S5L8 630 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 LRSAM1Q6UWE0 723 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 CYFIP1Q7L576 1253 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 TLK2Q86UE8 772 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 OR6J1Q8NGC5 347 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 EMID1Q96A84 441 aaPredicted RBP14.2□□□□□ -0.14
VMP1-202ENST00000585847 CDHR1Q96JP9 859 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 CCSER1Q9C0I3 900 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 CCDC39Q9UFE4 941 aa14.2□□□□□ -0.14
VMP1-202ENST00000585847 IPO5O00410 1097 aaKnown RBP14.19□□□□□ -0.14
VMP1-202ENST00000585847 MSCO60682 206 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 NR1I2O75469 434 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 CCNE2O96020 404 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 GH1P01241 217 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 CCDC192P0DO97 292 aa14.19□□□□□ -0.14
VMP1-202ENST00000585847 HOXD8P13378 290 aaPredicted RBP14.19□□□□□ -0.14
VMP1-202ENST00000585847 LIG1P18858 919 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms