RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 CCNA1P78396 465 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CDK17Q00537 523 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 IL1RL1Q01638 556 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 ATP2B2Q01814 1243 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 PLCB3Q01970 1234 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 ACY1Q03154 408 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 FMR1Q06787 632 aaKnown RBP eCLIP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 NCBP1Q09161 790 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 GRSF1Q12849 480 aaKnown RBP eCLIP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 TRAP1Q12931 704 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 USP4Q13107 963 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 MTX1Q13505 466 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SNX1Q13596 522 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 MTMR3Q13615 1198 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 PRKG1Q13976 671 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SCARB2Q14108 478 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 PDE3AQ14432 1141 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 STK38Q15208 465 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SAFBQ15424 915 aaKnown RBP eCLIP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 TCEA2Q15560 299 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 STK11Q15831 433 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CRY1Q16526 586 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CWF19L2Q2TBE0 894 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 LETM2Q2VYF4 491 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 ZNF792Q3KQV3 632 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SUPT20HL1Q3ZLR7 823 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 MMEL1Q495T6 779 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 C5orf22Q49AR2 442 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CFAP221Q4G0U5 840 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CRTC2Q53ET0 693 aaPredicted RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 KRTCAP3Q53RY4 240 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 HSP90AA5PQ58FG0 334 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 DCAF17Q5H9S7 520 aaPredicted RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 KRBOX4Q5JUW0 171 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 TEX35Q5T0J7 233 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 NBPF14Q5TI25 921 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 PCNX4Q63HM2 1172 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CREB3L3Q68CJ9 461 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 INTS3Q68E01 1043 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 MCTP1Q6DN14 999 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 GPR139Q6DWJ6 353 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 TWF2Q6IBS0 349 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 RAB12Q6IQ22 244 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 LIN54Q6MZP7 749 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CXorf57Q6NSI4 855 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 RETSATQ6NUM9 610 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 C8orf74Q6P047 294 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 ALKBH5Q6P6C2 394 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SHQ1Q6PI26 577 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 LARP1Q6PKG0 1096 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 USP17L2Q6R6M4 530 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 IGF2-ASQ6U949 168 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 LRSAM1Q6UWE0 723 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SYT10Q6XYQ8 523 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 BNC2Q6ZN30 1099 aaPredicted RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 ZNF600Q6ZNG1 722 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CCDC149Q6ZUS6 474 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 BRINP3Q76B58 766 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 NLRP9Q7RTR0 991 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 USP17L1Q7RTZ2 530 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 BNIPLQ7Z465 357 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 RIC3Q7Z5B4 369 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 DNAJB7Q7Z6W7 309 aaPredicted RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 GALNT7Q86SF2 657 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 THNSL2Q86YJ6 484 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 WDR63Q8IWG1 891 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SYTL1Q8IYJ3 562 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SCYL3Q8IZE3 742 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SPARTQ8N0X7 666 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 LSMEM2Q8N112 164 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 LRRC71Q8N4P6 559 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CAMKK1Q8N5S9 505 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 ZNF454Q8N9F8 522 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 ANKRD53Q8N9V6 530 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SUPT20HQ8NEM7 779 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 OR52K1Q8NGK4 314 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CEP70Q8NHQ1 597 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 GOT1L1Q8NHS2 421 aaPredicted RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 RFWD2Q8NHY2 731 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CTCFLQ8NI51 663 aaPredicted RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 KIF18AQ8NI77 898 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 C1orf216Q8TAB5 229 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 OTUD7AQ8TE49 926 aaPredicted RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SSH3Q8TE77 659 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 DENND1AQ8TEH3 1009 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 TRPC4APQ8TEL6 797 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 GTF3C2Q8WUA4 911 aaPredicted RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 HNRNPLLQ8WVV9 542 aaKnown RBP1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 DYDC1Q8WWB3 177 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 LZICQ8WZA0 190 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 LPIN2Q92539 896 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 RAPGEF5Q92565 580 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 ARHGAP45Q92619 1136 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CASP10Q92851 521 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SGK3Q96BR1 496 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SDCCAG3Q96C92 435 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 CHFRQ96EP1 664 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 SAAL1Q96ER3 474 aa1.91□□□□□ -2.1
NEDD4L-212ENST00000585594 VPS39Q96JC1 886 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms