RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 EHMT1Q9H9B1 1298 aa16.69■□□□□ 0.26
SDF2-202ENST00000585428 SGSM2O43147 1006 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 ATP9AO75110 1047 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 CTSHP09668 335 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 LINC00271P0C7V0 271 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 GPM6BQ13491 265 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 PUS10Q3MIT2 529 aaKnown RBP16.68■□□□□ 0.26
SDF2-202ENST00000585428 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
SDF2-202ENST00000585428 PTCRAQ6ISU1 281 aaPredicted RBP16.68■□□□□ 0.26
SDF2-202ENST00000585428 GIMAP8Q8ND71 665 aaPredicted RBP16.68■□□□□ 0.26
SDF2-202ENST00000585428 BANK1Q8NDB2 785 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 SMARCC2Q8TAQ2 1214 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 LMBR1Q8WVP7 490 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 RRP36Q96EU6 259 aaKnown RBP16.68■□□□□ 0.26
SDF2-202ENST00000585428 MTA3Q9BTC8 594 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 IFIH1Q9BYX4 1025 aaKnown RBP16.68■□□□□ 0.26
SDF2-202ENST00000585428 LY9Q9HBG7 655 aa16.68■□□□□ 0.26
SDF2-202ENST00000585428 ZNF215Q9UL58 517 aaPredicted RBP16.68■□□□□ 0.26
SDF2-202ENST00000585428 GSTTP1A0A1W2PQM5 241 aa16.67■□□□□ 0.26
SDF2-202ENST00000585428 C5orf67F2Z3F1 127 aa16.67■□□□□ 0.26
SDF2-202ENST00000585428 ENPP3O14638 875 aa16.67■□□□□ 0.26
SDF2-202ENST00000585428 IL9P15248 144 aa16.67■□□□□ 0.26
SDF2-202ENST00000585428 ARHGAP4P98171 946 aa16.67■□□□□ 0.26
SDF2-202ENST00000585428 NLRX1Q86UT6 975 aa16.67■□□□□ 0.26
SDF2-202ENST00000585428 SRBD1Q8N5C6 995 aaKnown RBP16.67■□□□□ 0.26
SDF2-202ENST00000585428 CUL5Q93034 780 aa16.67■□□□□ 0.26
SDF2-202ENST00000585428 IL17RAQ96F46 866 aa16.67■□□□□ 0.26
SDF2-202ENST00000585428 LZTS2Q9BRK4 669 aa16.67■□□□□ 0.26
SDF2-202ENST00000585428 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
SDF2-202ENST00000585428 KCNA2P16389 499 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 ITGB5P18084 799 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 KIF5BP33176 963 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 TCF7P36402 384 aaPredicted RBP16.66■□□□□ 0.26
SDF2-202ENST00000585428 MGAT3Q09327 533 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 TCEAL5Q5H9L2 206 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 MARCH8Q5T0T0 291 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 TAF2Q6P1X5 1199 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 RUFY4Q6ZNE9 571 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 ZNF654Q8IZM8 581 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 TMTC2Q8N394 836 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 SEPT1Q8WYJ6 367 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 GPRASP2Q96D09 838 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 PABPC5Q96DU9 382 aaKnown RBP16.66■□□□□ 0.26
SDF2-202ENST00000585428 MYL10Q9BUA6 226 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 MYH6P13533 1939 aa16.66■□□□□ 0.26
SDF2-202ENST00000585428 COL4A4P53420 1690 aaPredicted RBP16.65■□□□□ 0.26
SDF2-202ENST00000585428 MBLAC1A4D2B0 266 aaPredicted RBP16.65■□□□□ 0.26
SDF2-202ENST00000585428 FAM86C2PA6NEL3 165 aa16.65■□□□□ 0.26
SDF2-202ENST00000585428 DDAH1O94760 285 aa16.65■□□□□ 0.26
SDF2-202ENST00000585428 RB1P06400 928 aa16.65■□□□□ 0.26
SDF2-202ENST00000585428 BMPR1AP36894 532 aa16.65■□□□□ 0.26
SDF2-202ENST00000585428 TIGD5Q53EQ6 642 aa16.65■□□□□ 0.26
SDF2-202ENST00000585428 CTCFLQ8NI51 663 aaPredicted RBP16.65■□□□□ 0.26
SDF2-202ENST00000585428 ZNF689Q96CS4 500 aaPredicted RBP16.65■□□□□ 0.26
SDF2-202ENST00000585428 PSTPIP2Q9H939 334 aa16.65■□□□□ 0.26
SDF2-202ENST00000585428 HCN4Q9Y3Q4 1203 aa16.65■□□□□ 0.26
SDF2-202ENST00000585428 UBIAD1Q9Y5Z9 338 aa16.65■□□□□ 0.26
SDF2-202ENST00000585428 POTEB3A0JP26 581 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 H3BQ06 376 aaPredicted RBP16.64■□□□□ 0.25
SDF2-202ENST00000585428 MAFGO15525 162 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 PLEKHA8P1O95397 391 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 LTBRP36941 435 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 GNAQP50148 359 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 SP4Q02446 784 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 LPIN1Q14693 890 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 CTC1Q2NKJ3 1217 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 POTEBQ6S5H4 581 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 CRIPAKQ8N1N5 446 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 FIBCD1Q8N539 461 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 CLP1Q92989 425 aaKnown RBP16.64■□□□□ 0.25
SDF2-202ENST00000585428 CDHR1Q96JP9 859 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 NSUN3Q9H649 340 aaKnown RBP16.64■□□□□ 0.25
SDF2-202ENST00000585428 RC3H2Q9HBD1 1191 aaKnown RBP16.64■□□□□ 0.25
SDF2-202ENST00000585428 ERAP1Q9NZ08 941 aa16.64■□□□□ 0.25
SDF2-202ENST00000585428 BAZ2BQ9UIF8 2168 aaKnown RBP16.63■□□□□ 0.25
SDF2-202ENST00000585428 PRR33A8MZF0 331 aa16.63■□□□□ 0.25
SDF2-202ENST00000585428 NCK2O43639 380 aa16.63■□□□□ 0.25
SDF2-202ENST00000585428 GHRP10912 638 aa16.63■□□□□ 0.25
SDF2-202ENST00000585428 LIFRP42702 1097 aa16.63■□□□□ 0.25
SDF2-202ENST00000585428 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
SDF2-202ENST00000585428 CMTR1Q8N1G2 835 aaKnown RBP16.63■□□□□ 0.25
SDF2-202ENST00000585428 SMARCAD1Q9H4L7 1026 aa16.63■□□□□ 0.25
SDF2-202ENST00000585428 SEC63Q9UGP8 760 aaKnown RBP16.63■□□□□ 0.25
SDF2-202ENST00000585428 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
SDF2-202ENST00000585428 SIP14410 1827 aa16.63■□□□□ 0.25
SDF2-202ENST00000585428 COL4A6Q14031 1691 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 C19orf67A6NJJ6 358 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 PRC1O43663 620 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 ALADP13716 330 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 GRIK4Q16099 956 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 FBXO47Q5MNV8 452 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 RSPH3Q86UC2 560 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 RTN4RL1Q86UN2 441 aaPredicted RBP16.62■□□□□ 0.25
SDF2-202ENST00000585428 DNAJB3Q8WWF6 145 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 TMEM87BQ96K49 555 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 PCYT2Q99447 389 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 JADE2Q9NQC1 790 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 PRKAG3Q9UGI9 489 aa16.62■□□□□ 0.25
SDF2-202ENST00000585428 SH2B2O14492 632 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms