RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 MORF4L1Q9UBU8 362 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 RPTORQ8N122 1335 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 MYH7BA7E2Y1 1941 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 A0A087WWV3 80 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 ESPNB1AK53 854 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 FAM86B1E9PN63 330 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 MEIS1O00470 390 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 MSH4O15457 936 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 HMGCRP04035 888 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 FAM86B2P0C5J1 330 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 CAPN2P17655 700 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 RPA1P27694 616 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 HERVK_113P62684 666 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 IRX3P78415 501 aaPredicted RBP11.61□□□□□ -0.55
LIG3-203ENST00000585370 Q3C1V9 767 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 COBLL1Q53SF7 1204 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 TBC1D5Q92609 795 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 LENG9Q96B70 501 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 PAWRQ96IZ0 340 aaKnown RBP11.61□□□□□ -0.55
LIG3-203ENST00000585370 TRERF1Q96PN7 1200 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 PNMA5Q96PV4 448 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 RIT2Q99578 217 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 MXRA8Q9BRK3 442 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 POLR3CQ9BUI4 534 aaPredicted RBP11.61□□□□□ -0.55
LIG3-203ENST00000585370 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 TRIM9Q9C026 710 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.61□□□□□ -0.55
LIG3-203ENST00000585370 BLZF1Q9H2G9 400 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 IMPACTQ9P2X3 320 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 RBPJLQ9UBG7 517 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 RWDD2AQ9UIY3 292 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 NR2E3Q9Y5X4 410 aa11.61□□□□□ -0.55
LIG3-203ENST00000585370 LAMA2P24043 3122 aaKnown RBP11.6□□□□□ -0.55
LIG3-203ENST00000585370 IGLV3-22A0A075B6J6 115 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 POTEMA6NI47 508 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 PPP1R3GB7ZBB8 358 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 MAFGO15525 162 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 KLRC4O43908 158 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 CDK11BP21127 795 aaKnown RBP11.6□□□□□ -0.55
LIG3-203ENST00000585370 MSNP26038 577 aaKnown RBP11.6□□□□□ -0.55
LIG3-203ENST00000585370 FANCCQ00597 558 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 PPP2R5CQ13362 524 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 KMT5BQ4FZB7 885 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 PCNX4Q63HM2 1172 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 RNF207Q6ZRF8 634 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 UNC13DQ70J99 1090 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 REPS2Q8NFH8 660 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 GPRC5AQ8NFJ5 357 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 SYTL5Q8TDW5 730 aaPredicted RBP11.6□□□□□ -0.55
LIG3-203ENST00000585370 DIS3LQ8TF46 1054 aaKnown RBP11.6□□□□□ -0.55
LIG3-203ENST00000585370 NOC3LQ8WTT2 800 aaKnown RBP11.6□□□□□ -0.55
LIG3-203ENST00000585370 TRIB2Q92519 343 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 STAMQ92783 540 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 SLC5A5Q92911 643 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 ATG4CQ96DT6 458 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 DHTKD1Q96HY7 919 aaPredicted RBP11.6□□□□□ -0.55
LIG3-203ENST00000585370 CTAGE1Q96RT6 745 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 TEX13BQ9BXU2 312 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 TUFT1Q9NNX1 390 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 BLOC1S4Q9NUP1 217 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 EXOC1Q9NV70 894 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 DNM3Q9UQ16 869 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 PLXNB2O15031 1838 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 FRMPD4Q14CM0 1322 aa11.6□□□□□ -0.55
LIG3-203ENST00000585370 BICDL2A1A5D9 508 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 EVI5O60447 810 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 PSMD10O75832 226 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 SERPINC1P01008 464 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 CYP2B6P20813 491 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 COPB2P35606 906 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 STAT3P40763 770 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
LIG3-203ENST00000585370 ASIC1P78348 528 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 SPAG1Q07617 926 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 SPIRE1Q08AE8 756 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 PAK1Q13153 545 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 ADSSL1Q8N142 457 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 GIMAP8Q8ND71 665 aaPredicted RBP11.59□□□□□ -0.55
LIG3-203ENST00000585370 CHST13Q8NET6 341 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 NEK9Q8TD19 979 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 PLIN2Q99541 437 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 HMX1Q9NP08 348 aaPredicted RBP11.59□□□□□ -0.55
LIG3-203ENST00000585370 RNF146Q9NTX7 359 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 FANCLQ9NW38 375 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 FBXO40Q9UH90 709 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 ZKSCAN5Q9Y2L8 839 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 NFE2L3Q9Y4A8 694 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 UBIAD1Q9Y5Z9 338 aa11.59□□□□□ -0.55
LIG3-203ENST00000585370 NFIBO00712 420 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 PSMA7O14818 248 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 GAS7O60861 476 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 STAM2O75886 525 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 KIF20AO95235 890 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 XRCC5P13010 732 aaKnown RBP11.58□□□□□ -0.56
LIG3-203ENST00000585370 ZNF18P17022 549 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 CASP1P29466 404 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 UBASH3AP57075 661 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 GSDMDP57764 484 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 RPS6P62753 249 aaKnown RBP11.58□□□□□ -0.56
LIG3-203ENST00000585370 ERVK-9P63128 1117 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms