RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 GUCY2DQ02846 1103 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 ZNF579Q8NAF0 562 aaKnown RBP13.98□□□□□ -0.17
ITGB4-212ENST00000584558 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
ITGB4-212ENST00000584558 NLGN2Q8NFZ4 835 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 CCDC26Q8TAB7 109 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 NELFBQ8WX92 580 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 HVCN1Q96D96 273 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 OSBPL9Q96SU4 736 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 DBNDD1Q9H9R9 158 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 MLXIPQ9HAP2 919 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 ZNHIT6Q9NWK9 470 aaKnown RBP13.98□□□□□ -0.17
ITGB4-212ENST00000584558 PALM3A6NDB9 673 aaPredicted RBP13.98□□□□□ -0.17
ITGB4-212ENST00000584558 HMGB1P1B2RPK0 211 aaPredicted RBP13.98□□□□□ -0.17
ITGB4-212ENST00000584558 MGRN1O60291 552 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 TACC1O75410 805 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 MOCS3O95396 460 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 GLI1P08151 1106 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 TMOD1P28289 359 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 PAFAH1B1P43034 410 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 SF3A3Q12874 501 aaKnown RBP eCLIP13.98□□□□□ -0.17
ITGB4-212ENST00000584558 XRCC4Q13426 336 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 CAPRIN2Q6IMN6 1127 aaKnown RBP13.98□□□□□ -0.17
ITGB4-212ENST00000584558 BZW1Q7L1Q6 419 aaKnown RBP13.98□□□□□ -0.17
ITGB4-212ENST00000584558 KRT26Q7Z3Y9 468 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 IFT20Q8IY31 132 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 TCP11Q8WWU5 503 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 CUL5Q93034 780 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 TMX4Q9H1E5 349 aaPredicted RBP13.98□□□□□ -0.17
ITGB4-212ENST00000584558 CABP5Q9NP86 173 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 SLC39A2Q9NP94 309 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 AGPAT5Q9NUQ2 364 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 ADAMTS3O15072 1205 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 NCK2O43639 380 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 TRIM21P19474 475 aaKnown RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 SSR1P43307 286 aaKnown RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 ELF3P78545 371 aaPredicted RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 DACT2Q5SW24 774 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 CDC42EP5Q6NZY7 148 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 MB21D1Q8N884 522 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 TRIM58Q8NG06 486 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 PIK3R5Q8WYR1 880 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 CNKSR1Q969H4 720 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 MRIQ9BWK5 157 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 L3MBTL1Q9Y468 752 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 PCNTO95613 3336 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 PSME4Q14997 1843 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 HEXIM1O94992 359 aaKnown RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 CLTAP09496 248 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 SCNN1DP51172 638 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 DNA2P51530 1060 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 ICA1Q05084 483 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 RBBP5Q15291 538 aaKnown RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 GLE1Q53GS7 698 aaKnown RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 CDCA2Q69YH5 1023 aaPredicted RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 PPP4R3AQ6IN85 833 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 PNMA8AQ86V59 439 aaPredicted RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 SPAG5Q96R06 1193 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 YIPF3Q9GZM5 350 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 BATF3Q9NR55 127 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 CEP131Q9UPN4 1083 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 TRPC6Q9Y210 931 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 PLAAQ9Y263 795 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 IGKV6D-41A0A0C4DH26 115 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 WNT7AO00755 349 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 CYTH3O43739 400 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 PAK2Q13177 524 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 SNX1Q13596 522 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 NBPF9Q3BBW0 867 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 ODF2Q5BJF6 829 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 STRIP1Q5VSL9 837 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 ARFGAP2Q8N6H7 521 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 PCMTD1Q96MG8 357 aaPredicted RBP13.97□□□□□ -0.17
ITGB4-212ENST00000584558 NUP58Q9BVL2 599 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 MTFR1LQ9H019 292 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 USP40Q9NVE5 1235 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 CAPN11Q9UMQ6 739 aa13.97□□□□□ -0.17
ITGB4-212ENST00000584558 ECE2O60344 883 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 DPEP1P16444 411 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 SPA17Q15506 151 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 GPIHBP1Q8IV16 184 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 TEKT1Q969V4 418 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 MS4A14Q96JA4 679 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 ZDHHC15Q96MV8 337 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 SH3GLB2Q9NR46 395 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 RWDD2AQ9UIY3 292 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 HYOU1Q9Y4L1 999 aa13.96□□□□□ -0.17
ITGB4-212ENST00000584558 ANKRD33BA6NCL7 494 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 TRIM49BA6NDI0 452 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 SNUPNO95149 360 aaKnown RBP13.96□□□□□ -0.18
ITGB4-212ENST00000584558 ANP32DO95626 131 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 PARP1P09874 1014 aaKnown RBP13.96□□□□□ -0.18
ITGB4-212ENST00000584558 CRKP46108 304 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 GNAQP50148 359 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 RWDD2BP57060 319 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 ITIH3Q06033 890 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 PICALMQ13492 652 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 THEMIS2Q5TEJ8 643 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 EMC10Q5UCC4 262 aa13.96□□□□□ -0.18
ITGB4-212ENST00000584558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms