RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 NRCAMQ92823 1304 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 CFBP00751 764 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 ITGB1P05556 798 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 GHRP10912 638 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 PCP11498 1178 aaKnown RBP12.95□□□□□ -0.34
CASC3-208ENST00000583649 HOXC8P31273 242 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 ARHGAP4P98171 946 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 TRAF1Q13077 416 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 ADGRD2Q7Z7M1 963 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 NPAS4Q8IUM7 802 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 SAMD3Q8N6K7 520 aa12.95□□□□□ -0.34
CASC3-208ENST00000583649 PUF60Q9UHX1 559 aaKnown RBP12.95□□□□□ -0.34
CASC3-208ENST00000583649 M0QZ92 97 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 LGALS2P05162 132 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 LINC00271P0C7V0 271 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 CCND2P30279 289 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 NT5C2P49902 561 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 CAMK1Q14012 370 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 NEDD9Q14511 834 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 HIC1Q14526 733 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 TPRNQ4KMQ1 711 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 TMEM105Q8N8V8 129 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 RC3H2Q9HBD1 1191 aaKnown RBP12.94□□□□□ -0.34
CASC3-208ENST00000583649 SETD4Q9NVD3 440 aa12.94□□□□□ -0.34
CASC3-208ENST00000583649 MRPL42Q9Y6G3 142 aaKnown RBP12.94□□□□□ -0.34
CASC3-208ENST00000583649 SORBS3O60504 671 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 PPFIA3O75145 1194 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 GLP2RO95838 553 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 PDGFBP01127 241 aaPredicted RBP12.93□□□□□ -0.34
CASC3-208ENST00000583649 LMNAP02545 664 aaKnown RBP12.93□□□□□ -0.34
CASC3-208ENST00000583649 SNHG28P0DPA3 235 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 SDHBP21912 280 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
CASC3-208ENST00000583649 TECP42680 631 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 DUSP6Q16828 381 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 IER5Q5VY09 327 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 TMEM184AQ6ZMB5 413 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 RUFY4Q6ZNE9 571 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 TSHZ1Q6ZSZ6 1077 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 ATP8B4Q8TF62 1192 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 TNPO1Q92973 898 aaKnown RBP12.93□□□□□ -0.34
CASC3-208ENST00000583649 HINFPQ9BQA5 517 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 COL20A1Q9P218 1284 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 CACNA1HO95180 2353 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 PLXNA3P51805 1871 aa12.93□□□□□ -0.34
CASC3-208ENST00000583649 PER2O15055 1255 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 STAM2O75886 525 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 FGRP09769 529 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 DNAJB1P25685 340 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 BMS1Q14692 1282 aaKnown RBP12.92□□□□□ -0.34
CASC3-208ENST00000583649 PAN2Q504Q3 1202 aaKnown RBP12.92□□□□□ -0.34
CASC3-208ENST00000583649 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 ZMYM1Q5SVZ6 1142 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 METTL7BQ6UX53 244 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 VSIG10LQ86VR7 867 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 SIRT2Q8IXJ6 389 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 TBC1D5Q92609 795 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 RTP3Q9BQQ7 232 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 PDCD2LQ9BRP1 358 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 AMNQ9BXJ7 453 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 RNF41Q9H4P4 317 aaPredicted RBP12.92□□□□□ -0.34
CASC3-208ENST00000583649 EHMT1Q9H9B1 1298 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 ZBTB40Q9NUA8 1239 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 SQORQ9Y6N5 450 aa12.92□□□□□ -0.34
CASC3-208ENST00000583649 SPTBN4Q9H254 2564 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
CASC3-208ENST00000583649 RGS20O76081 388 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 CHRNA1P02708 482 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 GOLGA8HP0CJ92 632 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 ITIH3Q06033 890 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 LPIN1Q14693 890 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 ANKRD54Q6NXT1 300 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 ZC3H14Q6PJT7 736 aaKnown RBP12.91□□□□□ -0.34
CASC3-208ENST00000583649 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 IQCA1Q86XH1 822 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 DGKHQ86XP1 1220 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 THNSL1Q8IYQ7 743 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 ADGRF4Q8IZF3 695 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 GIMAP8Q8ND71 665 aaPredicted RBP12.91□□□□□ -0.34
CASC3-208ENST00000583649 FLCNQ8NFG4 579 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 RASGRP4Q8TDF6 673 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 LMBR1Q8WVP7 490 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 CASP10Q92851 521 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 SEC62Q99442 399 aaKnown RBP12.91□□□□□ -0.34
CASC3-208ENST00000583649 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 KAT14Q9H8E8 782 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 PCDHGC5Q9Y5F6 944 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 KIAA1217Q5T5P2 1943 aa12.91□□□□□ -0.34
CASC3-208ENST00000583649 MYO7AQ13402 2215 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 TTC41PQ6P2S7 1318 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 MED19A0JLT2 244 aaPredicted RBP12.9□□□□□ -0.34
CASC3-208ENST00000583649 RFX1P22670 979 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 SP100P23497 879 aaPredicted RBP12.9□□□□□ -0.34
CASC3-208ENST00000583649 MTHFRP42898 656 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 HSD17B4P51659 736 aa12.9□□□□□ -0.34
CASC3-208ENST00000583649 PGM5Q15124 567 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms