RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 PTGDRQ13258 359 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 SF3A1Q15459 793 aaKnown RBP15.82■□□□□ 0.12
GGA3-216ENST00000583282 SLFN12Q8IYM2 578 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 PAWRQ96IZ0 340 aaKnown RBP15.82■□□□□ 0.12
GGA3-216ENST00000583282 CHAMP1Q96JM3 812 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 FAM20AQ96MK3 541 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 USP28Q96RU2 1077 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 RIT2Q99578 217 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 POLR3EQ9NVU0 708 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 CLIC4Q9Y696 253 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 ALPK3Q96L96 1907 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 SCN10AQ9Y5Y9 1956 aa15.82■□□□□ 0.12
GGA3-216ENST00000583282 MOXD2PA6NHM9 499 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 POTEMA6NI47 508 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 WDR64B1ANS9 1081 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 BACH1O14867 736 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 TBX3O15119 743 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 SUPT20HL2P0C7V6 817 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 PDIA4P13667 645 aaKnown RBP15.81■□□□□ 0.12
GGA3-216ENST00000583282 MARK3P27448 753 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 DDIT3P35638 169 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 ATN1P54259 1190 aaPredicted RBP15.81■□□□□ 0.12
GGA3-216ENST00000583282 PURAQ00577 322 aaKnown RBP15.81■□□□□ 0.12
GGA3-216ENST00000583282 CCSAPQ6IQ19 270 aaPredicted RBP15.81■□□□□ 0.12
GGA3-216ENST00000583282 ZNF746Q6NUN9 644 aaPredicted RBP15.81■□□□□ 0.12
GGA3-216ENST00000583282 MIER3Q7Z3K6 550 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 ANKLE1Q8NAG6 615 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 VTI1AQ96AJ9 217 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 IPO9Q96P70 1041 aaKnown RBP15.81■□□□□ 0.12
GGA3-216ENST00000583282 SENP6Q9GZR1 1112 aaPredicted RBP15.81■□□□□ 0.12
GGA3-216ENST00000583282 C11orf49Q9H6J7 331 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 TTC12Q9H892 705 aaPredicted RBP15.81■□□□□ 0.12
GGA3-216ENST00000583282 STARD7Q9NQZ5 370 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 PHF24Q9UPV7 400 aa15.81■□□□□ 0.12
GGA3-216ENST00000583282 MYH9P35579 1960 aaKnown RBP15.8■□□□□ 0.12
GGA3-216ENST00000583282 GSTTP1A0A1W2PQM5 241 aa15.8■□□□□ 0.12
GGA3-216ENST00000583282 NCLP19338 710 aaKnown RBP15.8■□□□□ 0.12
GGA3-216ENST00000583282 NKX3-2P78367 333 aa15.8■□□□□ 0.12
GGA3-216ENST00000583282 ATP2C1P98194 919 aaPredicted RBP15.8■□□□□ 0.12
GGA3-216ENST00000583282 TMEM266Q2M3C6 531 aa15.8■□□□□ 0.12
GGA3-216ENST00000583282 MIS18BP1Q6P0N0 1132 aa15.8■□□□□ 0.12
GGA3-216ENST00000583282 CCDC60Q8IWA6 550 aaPredicted RBP15.8■□□□□ 0.12
GGA3-216ENST00000583282 SEPT1Q8WYJ6 367 aa15.8■□□□□ 0.12
GGA3-216ENST00000583282 GLT1D1Q96MS3 346 aa15.8■□□□□ 0.12
GGA3-216ENST00000583282 MTMR9Q96QG7 549 aa15.8■□□□□ 0.12
GGA3-216ENST00000583282 MTG1Q9BT17 334 aaPredicted RBP15.8■□□□□ 0.12
GGA3-216ENST00000583282 EMSYQ7Z589 1322 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 EML1O00423 815 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 F2P00734 622 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 HOXD8P13378 290 aaPredicted RBP15.79■□□□□ 0.12
GGA3-216ENST00000583282 TECP42680 631 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 JAK3P52333 1124 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 NUCB2P80303 420 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 DNM1Q05193 864 aaKnown RBP15.79■□□□□ 0.12
GGA3-216ENST00000583282 PPP2R5CQ13362 524 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 MFSD10Q14728 455 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 FAM47CQ5HY64 1035 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 TRMT1LQ7Z2T5 733 aaKnown RBP15.79■□□□□ 0.12
GGA3-216ENST00000583282 NECAB2Q7Z6G3 386 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 SMAP1Q8IYB5 467 aaPredicted RBP15.79■□□□□ 0.12
GGA3-216ENST00000583282 C4orf32Q8N8J7 132 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 GLG1Q92896 1179 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 ZNF396Q96N95 335 aaPredicted RBP15.79■□□□□ 0.12
GGA3-216ENST00000583282 PCYT2Q99447 389 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 TSEN34Q9BSV6 310 aaKnown RBP15.79■□□□□ 0.12
GGA3-216ENST00000583282 AZI2Q9H6S1 392 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 DISC1Q9NRI5 854 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 ZNF215Q9UL58 517 aaPredicted RBP15.79■□□□□ 0.12
GGA3-216ENST00000583282 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 ARID2Q68CP9 1835 aa15.79■□□□□ 0.12
GGA3-216ENST00000583282 IGSF9BQ9UPX0 1349 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 VWA3AA6NCI4 1184 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 BMP15O95972 392 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 PSAPP07602 524 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 MARCKSP29966 332 aaPredicted RBP15.78■□□□□ 0.12
GGA3-216ENST00000583282 SFNP31947 248 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 PSEN2P49810 448 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 CYP4A11Q02928 519 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 SPIRE1Q08AE8 756 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 STK38Q15208 465 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 UGCGQ16739 394 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 FAM160B1Q5W0V3 765 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 BANK1Q8NDB2 785 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 KAT2BQ92831 832 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 C16orf70Q9BSU1 422 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 KATNAL1Q9BW62 490 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 ZNF302Q9NR11 478 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 TFIP11Q9UBB9 837 aaKnown RBP15.78■□□□□ 0.12
GGA3-216ENST00000583282 GABBR1Q9UBS5 961 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 PCDHA12Q9UN75 941 aa15.78■□□□□ 0.12
GGA3-216ENST00000583282 TCHHQ07283 1943 aa15.77■□□□□ 0.12
GGA3-216ENST00000583282 A0A0U1RQG5 324 aaPredicted RBP15.77■□□□□ 0.12
GGA3-216ENST00000583282 LAD1O00515 517 aa15.77■□□□□ 0.12
GGA3-216ENST00000583282 KPNA6O60684 536 aa15.77■□□□□ 0.12
GGA3-216ENST00000583282 PPFIA4O75335 1185 aa15.77■□□□□ 0.12
GGA3-216ENST00000583282 COL6A1P12109 1028 aa15.77■□□□□ 0.12
GGA3-216ENST00000583282 PTPAQ15257 358 aa15.77■□□□□ 0.12
GGA3-216ENST00000583282 KIAA0753Q2KHM9 967 aa15.77■□□□□ 0.12
GGA3-216ENST00000583282 SWSAP1Q6NVH7 229 aa15.77■□□□□ 0.12
GGA3-216ENST00000583282 PDXDC2PQ6P474 469 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms