RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 HINFPQ9BQA5 517 aa8.25□□□□□ -1.09
CTC1-211ENST00000583254 NAPBQ9H115 298 aa8.25□□□□□ -1.09
CTC1-211ENST00000583254 S1PR5Q9H228 398 aa8.25□□□□□ -1.09
CTC1-211ENST00000583254 RNPEPQ9H4A4 650 aa8.25□□□□□ -1.09
CTC1-211ENST00000583254 DLL3Q9NYJ7 618 aa8.25□□□□□ -1.09
CTC1-211ENST00000583254 PNMA2Q9UL42 364 aa8.25□□□□□ -1.09
CTC1-211ENST00000583254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.25□□□□□ -1.09
CTC1-211ENST00000583254 NR2E1Q9Y466 385 aa8.25□□□□□ -1.09
CTC1-211ENST00000583254 SUPT16HQ9Y5B9 1047 aaKnown RBP8.25□□□□□ -1.09
CTC1-211ENST00000583254 CEP250Q9BV73 2442 aa8.25□□□□□ -1.09
CTC1-211ENST00000583254 DOCK5Q9H7D0 1870 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 PATL2C9JE40 543 aaKnown RBP8.24□□□□□ -1.09
CTC1-211ENST00000583254 H3BRB1 525 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 ENPP3O14638 875 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 PI15O43692 258 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 PPFIA4O75335 1185 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 GGPS1O95749 300 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 LGALS2P05162 132 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 GATMP50440 423 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 LPIN1Q14693 890 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 FAM26DQ5JW98 314 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 CELF3Q5SZQ8 465 aaKnown RBP8.24□□□□□ -1.09
CTC1-211ENST00000583254 ARHGEF16Q5VV41 709 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 MYSM1Q5VVJ2 828 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 LLGL2Q6P1M3 1020 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 SYCE2Q6PIF2 218 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 KBTBD3Q8NAB2 608 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 IWS1Q96ST2 819 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 RMDN3Q96TC7 470 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 NACAP1Q9BZK3 213 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 POMKQ9H5K3 350 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 TUT1Q9H6E5 874 aaKnown RBP8.24□□□□□ -1.09
CTC1-211ENST00000583254 SETD4Q9NVD3 440 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 R4GN57 208 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 MAP1BP46821 2468 aaKnown RBP8.24□□□□□ -1.09
CTC1-211ENST00000583254 CCDC171Q6TFL3 1326 aa8.24□□□□□ -1.09
CTC1-211ENST00000583254 CHD6Q8TD26 2715 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 MYH6P13533 1939 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 RNF113AO15541 343 aaKnown RBP8.23□□□□□ -1.09
CTC1-211ENST00000583254 RANBP6O60518 1105 aaKnown RBP8.23□□□□□ -1.09
CTC1-211ENST00000583254 CHRNA1P02708 482 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 NR3C2P08235 984 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 SRGAP2BP0DMP2 458 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 PDHBP11177 359 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 AOC1P19801 751 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 UBA1P22314 1058 aaKnown RBP8.23□□□□□ -1.09
CTC1-211ENST00000583254 NOVP48745 357 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 ZNF543Q08ER8 600 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 RSPO4Q2I0M5 234 aaPredicted RBP8.23□□□□□ -1.09
CTC1-211ENST00000583254 PLPP4Q5VZY2 271 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 TRIM50Q86XT4 487 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 DTWD2Q8NBA8 298 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 RGS22Q8NE09 1264 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 CYP2W1Q8TAV3 490 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 SEC62Q99442 399 aaKnown RBP8.23□□□□□ -1.09
CTC1-211ENST00000583254 CDCA3Q99618 268 aaPredicted RBP8.23□□□□□ -1.09
CTC1-211ENST00000583254 TMEM47Q9BQJ4 181 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 CPVLQ9H3G5 476 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 EHMT1Q9H9B1 1298 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 PXMP2Q9NR77 195 aa8.23□□□□□ -1.09
CTC1-211ENST00000583254 RALYQ9UKM9 306 aaKnown RBP8.23□□□□□ -1.09
CTC1-211ENST00000583254 FNDC1Q4ZHG4 1894 aaPredicted RBP8.22□□□□□ -1.09
CTC1-211ENST00000583254 FSD2A1L4K1 749 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 RAB11FIP3O75154 756 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 EIF3JO75822 258 aaKnown RBP8.22□□□□□ -1.09
CTC1-211ENST00000583254 TOP1P11387 765 aaKnown RBP8.22□□□□□ -1.09
CTC1-211ENST00000583254 MYCLP12524 364 aaPredicted RBP8.22□□□□□ -1.09
CTC1-211ENST00000583254 NPR3P17342 541 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 IBSPP21815 317 aaPredicted RBP8.22□□□□□ -1.09
CTC1-211ENST00000583254 ERVFC1P60507 584 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 ARHGAP4P98171 946 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 SP2Q02086 613 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 MGAT3Q09327 533 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 KCNC3Q14003 757 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 TMEM184AQ6ZMB5 413 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 RUFY4Q6ZNE9 571 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 NPAS4Q8IUM7 802 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 DCLK2Q8N568 766 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 LMBR1Q8WVP7 490 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 GPKOWQ92917 476 aaPredicted RBP eCLIP8.22□□□□□ -1.09
CTC1-211ENST00000583254 USP24Q9UPU5 2620 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 ABCB11O95342 1321 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 KAT6AQ92794 2004 aa8.22□□□□□ -1.09
CTC1-211ENST00000583254 OTOGLQ3ZCN5 2332 aa8.21□□□□□ -1.09
CTC1-211ENST00000583254 SPTBN2O15020 2390 aa8.21□□□□□ -1.09
CTC1-211ENST00000583254 LOXHD1Q8IVV2 1947 aa8.21□□□□□ -1.09
CTC1-211ENST00000583254 FANCMQ8IYD8 2048 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 FSCN2O14926 492 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 WEE2P0C1S8 567 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 GOLGA8HP0CJ92 632 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 GNAT1P11488 350 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 CD52P31358 61 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 ADAM17P78536 824 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 APOBRQ0VD83 1088 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 COL9A2Q14055 689 aaPredicted RBP8.21□□□□□ -1.1
CTC1-211ENST00000583254 CDC37Q16543 378 aaPredicted RBP8.21□□□□□ -1.1
CTC1-211ENST00000583254 FBXO47Q5MNV8 452 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 SPOUT1Q5T280 376 aaKnown RBP8.21□□□□□ -1.1
CTC1-211ENST00000583254 TSHZ3Q63HK5 1081 aa8.21□□□□□ -1.1
CTC1-211ENST00000583254 TSHZ1Q6ZSZ6 1077 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms