RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 IL17RAQ96F46 866 aa15.66■□□□□ 0.1
SS18-222ENST00000582792 SENP2Q9HC62 589 aa15.66■□□□□ 0.1
SS18-222ENST00000582792 RTEL1Q9NZ71 1219 aa15.66■□□□□ 0.1
SS18-222ENST00000582792 PRKAG3Q9UGI9 489 aa15.66■□□□□ 0.1
SS18-222ENST00000582792 NRCAMQ92823 1304 aa15.66■□□□□ 0.1
SS18-222ENST00000582792 POTEB3A0JP26 581 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 ERICH2A1L162 156 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 DCXO43602 365 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 LINC00271P0C7V0 271 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 CTNNB1P35222 781 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 ZP2Q05996 745 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 UTP14CQ5TAP6 766 aaKnown RBP15.65■□□□□ 0.1
SS18-222ENST00000582792 POTEBQ6S5H4 581 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 EP400NLQ6ZTU2 488 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 RPAINQ86UA6 219 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 FIBCD1Q8N539 461 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 SENP7Q9BQF6 1050 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 CLDND1Q9NY35 253 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 TELO2Q9Y4R8 837 aa15.65■□□□□ 0.1
SS18-222ENST00000582792 ATG2AQ2TAZ0 1938 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 NCK2O43639 380 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 CHRNA1P02708 482 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 RB1P06400 928 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 CYP21A2P08686 494 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 WTAPQ15007 396 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 CSPP1Q1MSJ5 1256 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 PCNX4Q63HM2 1172 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 XRRA1Q6P2D8 792 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 UIMC1Q96RL1 719 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 LMAN2LQ9H0V9 348 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 EHMT1Q9H9B1 1298 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 RWDD3Q9Y3V2 267 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
SS18-222ENST00000582792 ADGRA3Q8IWK6 1321 aa15.64■□□□□ 0.09
SS18-222ENST00000582792 MYO7AQ13402 2215 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 C19orf67A6NJJ6 358 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 GHRP10912 638 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 BMPR1AP36894 532 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 LTBRP36941 435 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 SP4Q02446 784 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 MGAT3Q09327 533 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 SART3Q15020 963 aaKnown RBP15.63■□□□□ 0.09
SS18-222ENST00000582792 CTC1Q2NKJ3 1217 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 TAF2Q6P1X5 1199 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 RUFY4Q6ZNE9 571 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 ADHFE1Q8IWW8 467 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 C11orf84Q9BUA3 381 aaPredicted RBP15.63■□□□□ 0.09
SS18-222ENST00000582792 RC3H2Q9HBD1 1191 aaKnown RBP15.63■□□□□ 0.09
SS18-222ENST00000582792 KAT6AQ92794 2004 aa15.63■□□□□ 0.09
SS18-222ENST00000582792 PIK3CDO00329 1044 aa15.62■□□□□ 0.09
SS18-222ENST00000582792 MEIS2O14770 477 aa15.62■□□□□ 0.09
SS18-222ENST00000582792 HYAL1Q12794 435 aa15.62■□□□□ 0.09
SS18-222ENST00000582792 USP17L6PQ6QN14 398 aa15.62■□□□□ 0.09
SS18-222ENST00000582792 CATIPQ7Z7H3 387 aa15.62■□□□□ 0.09
SS18-222ENST00000582792 RALYLQ86SE5 291 aaKnown RBP15.62■□□□□ 0.09
SS18-222ENST00000582792 NLRX1Q86UT6 975 aa15.62■□□□□ 0.09
SS18-222ENST00000582792 ALYREFQ86V81 257 aaKnown RBP15.62■□□□□ 0.09
SS18-222ENST00000582792 GIMAP8Q8ND71 665 aaPredicted RBP15.62■□□□□ 0.09
SS18-222ENST00000582792 SMARCC2Q8TAQ2 1214 aa15.62■□□□□ 0.09
SS18-222ENST00000582792 PIBF1Q8WXW3 757 aa15.62■□□□□ 0.09
SS18-222ENST00000582792 CLP1Q92989 425 aaKnown RBP15.62■□□□□ 0.09
SS18-222ENST00000582792 CUL5Q93034 780 aa15.62■□□□□ 0.09
SS18-222ENST00000582792 E7EWF7 191 aa15.61■□□□□ 0.09
SS18-222ENST00000582792 GRM6O15303 877 aa15.61■□□□□ 0.09
SS18-222ENST00000582792 TCF7P36402 384 aaPredicted RBP15.61■□□□□ 0.09
SS18-222ENST00000582792 PTH1RQ03431 593 aa15.61■□□□□ 0.09
SS18-222ENST00000582792 LPIN1Q14693 890 aa15.61■□□□□ 0.09
SS18-222ENST00000582792 RSPH3Q86UC2 560 aa15.61■□□□□ 0.09
SS18-222ENST00000582792 NCOA7Q8NI08 942 aa15.61■□□□□ 0.09
SS18-222ENST00000582792 ZNF689Q96CS4 500 aaPredicted RBP15.61■□□□□ 0.09
SS18-222ENST00000582792 SPZ1Q9BXG8 430 aa15.61■□□□□ 0.09
SS18-222ENST00000582792 UPF3BQ9BZI7 483 aaKnown RBP15.61■□□□□ 0.09
SS18-222ENST00000582792 KCNH6Q9H252 994 aa15.61■□□□□ 0.09
SS18-222ENST00000582792 TAF6LQ9Y6J9 622 aa15.61■□□□□ 0.09
SS18-222ENST00000582792 MBLAC1A4D2B0 266 aaPredicted RBP15.6■□□□□ 0.09
SS18-222ENST00000582792 ENPP3O14638 875 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 MBTPS2O43462 519 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 MMP1P03956 469 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 GSPT1P15170 499 aaKnown RBP15.6■□□□□ 0.09
SS18-222ENST00000582792 KCNA2P16389 499 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 PDE4AP27815 886 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 IRS1P35568 1242 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 DLX2Q07687 328 aaPredicted RBP15.6■□□□□ 0.09
SS18-222ENST00000582792 PPFIA1Q13136 1202 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 SMAD2Q15796 467 aaKnown RBP15.6■□□□□ 0.09
SS18-222ENST00000582792 GRIK4Q16099 956 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 FBXO47Q5MNV8 452 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 IGDCC4Q8TDY8 1250 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 SEPT1Q8WYJ6 367 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 GPRASP2Q96D09 838 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 RRP36Q96EU6 259 aaKnown RBP15.6■□□□□ 0.09
SS18-222ENST00000582792 MAP3K14Q99558 947 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 POP1Q99575 1024 aaKnown RBP15.6■□□□□ 0.09
SS18-222ENST00000582792 ERAP1Q9NZ08 941 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 TUBE1Q9UJT0 475 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 TTC3P53804 2025 aa15.6■□□□□ 0.09
SS18-222ENST00000582792 GSTTP1A0A1W2PQM5 241 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 ATP9AO75110 1047 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 DGKIO75912 1065 aa15.59■□□□□ 0.09
SS18-222ENST00000582792 SMARCA1P28370 1054 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms