RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	TOE1	Q96GM8	510 aa	Known RBP	4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	PUS7	Q96PZ0	661 aa	Known RBP	4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	PIF1	Q9H611	641 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	NCOA5	Q9HCD5	579 aa	Known RBP	4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	HSPBP1	Q9NZL4	362 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	ASH2L	Q9UBL3	628 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	NDOR1	Q9UHB4	597 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	ABCA8	O94911	1581 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	ABCC2	Q92887	1545 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	KDM5B	Q9UGL1	1544 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	CEP162	Q5TB80	1403 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	PLD2	O14939	933 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	NKRF	O15226	690 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	PLA2G1B	P04054	148 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	COL6A2	P12110	1019 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	CANX	P27824	592 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	STAT5A	P42229	794 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	SQSTM1	Q13501	440 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	CR1L	Q2VPA4	569 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	VWA3B	Q502W6	1294 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	FAM47C	Q5HY64	1035 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	CYB5RL	Q6IPT4	315 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	SPOCD1	Q6ZMY3	1216 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	C16orf59	Q7L2K0	433 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	SAPCD2	Q86UD0	394 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	FAM26E	Q8N5C1	309 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	LINC00482	Q8N8I6	264 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	FBXW5	Q969U6	566 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	NOX5	Q96PH1	765 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	TMEM260	Q9NX78	707 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	DSE	Q9UL01	958 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	TBX22	Q9Y458	520 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	PCDHA9	Q9Y5H5	950 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	MAPKBP1	O60336	1514 aa		4.56	□□□□□ -1.68
MSI2-215	ENST00000582453	FHOD3	Q2V2M9	1422 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	SH3D21	A4FU49	640 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	SLC27A2	O14975	620 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	EPHA5	P54756	1037 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	TUSC3	Q13454	348 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	FNDC3B	Q53EP0	1204 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	TEPP	Q6URK8	271 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	BRAP	Q7Z569	592 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	SYNPO	Q8N3V7	929 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	SLC7A14	Q8TBB6	771 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	ZBTB8A	Q96BR9	441 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	GORASP1	Q9BQQ3	440 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	CATSPERZ	Q9NTU4	200 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	CASKIN1	Q8WXD9	1431 aa		4.55	□□□□□ -1.68
MSI2-215	ENST00000582453	BTBD11	A6QL63	1104 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	FFAR3	O14843	346 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	LRG1	P02750	347 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	PYGM	P11217	842 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	ITGA1	P56199	1179 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	ST5	P78524	1137 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	DLX2	Q07687	328 aa	Predicted RBP	4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	GPR19	Q15760	415 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	CRY1	Q16526	586 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	LIPI	Q6XZB0	460 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	KCTD1	Q719H9	257 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	NLGN4X	Q8N0W4	816 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	TTLL6	Q8N841	843 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	KY	Q8NBH2	561 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	CLEC4D	Q8WXI8	215 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	SCLY	Q96I15	445 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	RNPC3	Q96LT9	517 aa	Known RBP	4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	KANSL2	Q9H9L4	492 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	TRIM39	Q9HCM9	518 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	NTM	Q9P121	344 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	SRPK3	Q9UPE1	567 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	NUP153	P49790	1475 aa	Known RBP	4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	PLB1	Q6P1J6	1458 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	FYCO1	Q9BQS8	1478 aa		4.54	□□□□□ -1.68
MSI2-215	ENST00000582453	TCRBV5S4A2T	A0A5A2	114 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	TCRBV16S1A1N1	A0A5B0	115 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	TLDC2	A0PJX2	215 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	CCDC66	A2RUB6	948 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	RASGRP1	O95267	797 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	NPTXR	O95502	500 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	SRGAP2C	P0DJJ0	459 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	PDE6A	P16499	860 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	LACTB	P83111	547 aa	Predicted RBP	4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	PAN2	Q504Q3	1202 aa	Known RBP	4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	FIGN	Q5HY92	759 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	ARHGAP36	Q6ZRI8	547 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	TTLL7	Q6ZT98	887 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	HOMER1	Q86YM7	354 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	SP8	Q8IXZ3	490 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	SH3RF2	Q8TEC5	729 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	ZNF526	Q8TF50	670 aa	Predicted RBP	4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	TMEM209	Q96SK2	561 aa		4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	CELF4	Q9BZC1	486 aa	Known RBP	4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	LUC7L	Q9NQ29	371 aa	Known RBP	4.53	□□□□□ -1.68
MSI2-215	ENST00000582453	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms