RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 FBXL16Q8N461 479 aa17.58■□□□□ 0.4
CCDC57-215ENST00000582100 PPM1EQ8WY54 764 aa17.58■□□□□ 0.4
CCDC57-215ENST00000582100 JAKMIP1Q96N16 626 aaKnown RBP17.58■□□□□ 0.4
CCDC57-215ENST00000582100 MXRA8Q9BRK3 442 aa17.58■□□□□ 0.4
CCDC57-215ENST00000582100 SNX14Q9Y5W7 946 aa17.58■□□□□ 0.4
CCDC57-215ENST00000582100 PTPRSQ13332 1948 aa17.58■□□□□ 0.4
CCDC57-215ENST00000582100 SMCO2A6NFE2 343 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 REC8O95072 547 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 GJB5O95377 273 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 POU3F3P20264 500 aaPredicted RBP17.57■□□□□ 0.4
CCDC57-215ENST00000582100 ADD1P35611 737 aaKnown RBP17.57■□□□□ 0.4
CCDC57-215ENST00000582100 METAP2P50579 478 aaKnown RBP eCLIP17.57■□□□□ 0.4
CCDC57-215ENST00000582100 ADCY7P51828 1080 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 PLEKHG4Q58EX7 1191 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 BLOC1S2Q6QNY1 142 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 Q6ZUG5 572 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 DBF4BQ8NFT6 615 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 ZBED2Q9BTP6 218 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 CUL9Q8IWT3 2517 aa17.57■□□□□ 0.4
CCDC57-215ENST00000582100 TRANK1O15050 2925 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 ARHGEF15O94989 841 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 CPA1P15085 419 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 CLK2P49760 499 aaKnown RBP17.56■□□□□ 0.4
CCDC57-215ENST00000582100 ARHGAP4P98171 946 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 APOBRQ0VD83 1088 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 AP3B2Q13367 1082 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 MKRN4PQ13434 485 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-215ENST00000582100 CCDC85BQ15834 202 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-215ENST00000582100 LMBR1Q8WVP7 490 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 SYMPKQ92797 1274 aaKnown RBP17.56■□□□□ 0.4
CCDC57-215ENST00000582100 RAD9AQ99638 391 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 ANO3Q9BYT9 981 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 SMARCAD1Q9H4L7 1026 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 PRDM6Q9NQX0 595 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 KCNH7Q9NS40 1196 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 ERAP1Q9NZ08 941 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 PKD2L1Q9P0L9 805 aa17.56■□□□□ 0.4
CCDC57-215ENST00000582100 NAP1L2Q9ULW6 460 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-215ENST00000582100 RFXAPO00287 272 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 EPB41L2O43491 1005 aaKnown RBP17.55■□□□□ 0.4
CCDC57-215ENST00000582100 RPS6KB1P23443 525 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 PSMA5P28066 241 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 SREBF1P36956 1147 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 PFKFB3Q16875 520 aaPredicted RBP17.55■□□□□ 0.4
CCDC57-215ENST00000582100 CEP55Q53EZ4 464 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 FAM26DQ5JW98 314 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 TMCO2Q7Z6W1 182 aaPredicted RBP17.55■□□□□ 0.4
CCDC57-215ENST00000582100 RPAINQ86UA6 219 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 CYP2W1Q8TAV3 490 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 ATXN2LQ8WWM7 1075 aaKnown RBP17.55■□□□□ 0.4
CCDC57-215ENST00000582100 ARNTL2Q8WYA1 636 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 BRF1Q92994 677 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 AGXT2Q9BYV1 514 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 CERS4Q9HA82 394 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 JPH1Q9HDC5 661 aaPredicted RBP17.55■□□□□ 0.4
CCDC57-215ENST00000582100 KAT6AQ92794 2004 aa17.55■□□□□ 0.4
CCDC57-215ENST00000582100 NID2Q14112 1375 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 NFASCO94856 1347 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 LCHNA4D1U4 455 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 EPOPA6NHQ4 379 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 MEIS1O00470 390 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 CTSHP09668 335 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 SCG2P13521 617 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 PPFIA1Q13136 1202 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 TJAP1Q5JTD0 557 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 TAF2Q6P1X5 1199 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCDC57-215ENST00000582100 SEPT8Q92599 483 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 GLG1Q92896 1179 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 THEGQ9P2T0 379 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 SLC9A2Q9UBY0 812 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 MTCH2Q9Y6C9 303 aa17.54■□□□□ 0.4
CCDC57-215ENST00000582100 REV3LO60673 3130 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 ESYT2A0FGR8 921 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 PRPF3O43395 683 aaKnown RBP17.53■□□□□ 0.4
CCDC57-215ENST00000582100 GTPBP6O43824 516 aaPredicted RBP17.53■□□□□ 0.4
CCDC57-215ENST00000582100 AMHP03971 560 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 ARP10275 920 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 MARK3P27448 753 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 GRIK4Q16099 956 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 NIPA1Q7RTP0 329 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 PCYT2Q99447 389 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 SDF4Q9BRK5 362 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 ZMYND12Q9H0C1 365 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 TSPYL2Q9H2G4 693 aaPredicted RBP17.53■□□□□ 0.4
CCDC57-215ENST00000582100 AGO4Q9HCK5 861 aaKnown RBP17.53■□□□□ 0.4
CCDC57-215ENST00000582100 TMEM260Q9NX78 707 aa17.53■□□□□ 0.4
CCDC57-215ENST00000582100 SPTBN5Q9NRC6 3674 aaKnown RBP17.53■□□□□ 0.4
CCDC57-215ENST00000582100 MICAL3Q7RTP6 2002 aa17.52■□□□□ 0.4
CCDC57-215ENST00000582100 MBLAC1A4D2B0 266 aaPredicted RBP17.52■□□□□ 0.4
CCDC57-215ENST00000582100 RRN3P2A6NIE6 340 aa17.52■□□□□ 0.4
CCDC57-215ENST00000582100 PKN1Q16512 942 aa17.52■□□□□ 0.4
CCDC57-215ENST00000582100 MCTP2Q6DN12 878 aa17.52■□□□□ 0.4
CCDC57-215ENST00000582100 CCDC12Q8WUD4 166 aaPredicted RBP17.52■□□□□ 0.4
CCDC57-215ENST00000582100 APBB2Q92870 758 aa17.52■□□□□ 0.4
CCDC57-215ENST00000582100 TNPO1Q92973 898 aaKnown RBP17.52■□□□□ 0.4
CCDC57-215ENST00000582100 OSBPL7Q9BZF2 842 aa17.52■□□□□ 0.4
CCDC57-215ENST00000582100 AZI2Q9H6S1 392 aa17.52■□□□□ 0.4
CCDC57-215ENST00000582100 INSL6Q9Y581 213 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms