RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 JPH1Q9HDC5 661 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-222ENST00000581708 PDRG1Q9NUG6 133 aa14.36□□□□□ -0.11
CDK5RAP3-222ENST00000581708 CXXC1Q9P0U4 656 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-222ENST00000581708 PCDHA11Q9Y5I1 949 aa14.36□□□□□ -0.11
CDK5RAP3-222ENST00000581708 TRIP12Q14669 1992 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 CDKL5O76039 1030 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 ATP2A2P16615 1042 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 ZNF76P36508 570 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 SLC26A2P50443 739 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 ADAM17P78536 824 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 GALNT17Q6IS24 598 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 CNKSR3Q6P9H4 555 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 RPAINQ86UA6 219 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 PHKBQ93100 1093 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 CDX2Q99626 313 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 SLC26A6Q9BXS9 759 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 UPF3BQ9BZI7 483 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 RNPEPQ9H4A4 650 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 ZNF576Q9H609 170 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 SLC9A2Q9UBY0 812 aa14.35□□□□□ -0.11
CDK5RAP3-222ENST00000581708 ABHD14A-ACY1A0A1B0GW23 586 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 GSTTP1A0A1W2PQM5 241 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 ZBBXA8MT70 800 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 LGR5O75473 907 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 DEXIO95424 95 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 SETQ01105 290 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 SSRP1Q08945 709 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 TAF2Q6P1X5 1199 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 FAM43BQ6ZT52 329 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 PLPPR4Q7Z2D5 763 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 PPP1R13LQ8WUF5 828 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 AZI2Q9H6S1 392 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 AGO4Q9HCK5 861 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 SCN5AQ14524 2016 aa14.34□□□□□ -0.11
CDK5RAP3-222ENST00000581708 DOCK5Q9H7D0 1870 aa14.33□□□□□ -0.11
CDK5RAP3-222ENST00000581708 RRN3P2A6NIE6 340 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 RSPH10B2B2RC85 870 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 ATG7O95352 703 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 RSPH10BP0C881 870 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 CIITAP33076 1130 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 USP11P51784 963 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 CCT2P78371 535 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 ZNF200P98182 395 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 SP4Q02446 784 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 HIC1Q14526 733 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 GPNMBQ14956 572 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 ZNF618Q5T7W0 954 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 UTP14CQ5TAP6 766 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 JAKMIP3Q5VZ66 844 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 TRAF7Q6Q0C0 670 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 CYP2W1Q8TAV3 490 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 GLG1Q92896 1179 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 SLC28A3Q9HAS3 691 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 NCOA5Q9HCD5 579 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 TBC1D22BQ9NU19 505 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 TMEM260Q9NX78 707 aa14.33□□□□□ -0.12
CDK5RAP3-222ENST00000581708 KAT6AQ92794 2004 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 IGLV3-22A0A075B6J6 115 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 KIF28PB7ZC32 967 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 TREHO43280 583 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 NBNO60934 754 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 ARP10275 920 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 THPOP40225 353 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 KCNJ6P48051 423 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 ACTR2P61160 394 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 IKBKEQ14164 716 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 FAM26DQ5JW98 314 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 RSPH3Q86UC2 560 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 PLA2G4DQ86XP0 818 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 TRIM50Q86XT4 487 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 FAM161BQ96MY7 647 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 SETD4Q9NVD3 440 aa14.32□□□□□ -0.12
CDK5RAP3-222ENST00000581708 TRANK1O15050 2925 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 IGKV6D-21A0A0A0MT36 114 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 MBLAC1A4D2B0 266 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 GRXCR1A8MXD5 290 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 FAM86B1E9PN63 330 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 IPO5O00410 1097 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 FAM86B2P0C5J1 330 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 PBX2P40425 430 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 NLRP5P59047 1200 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 PPFIA1Q13136 1202 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 ITGB3BPQ13352 177 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 HERC6Q8IVU3 1022 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 DAGLBQ8NCG7 672 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 TET1Q8NFU7 2136 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 LMBR1Q8WVP7 490 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 WNT8BQ93098 351 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 PGBD1Q96JS3 809 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 SLKQ9H2G2 1235 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 TCEAL9Q9UHQ7 104 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 PCDHA4Q9UN74 947 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 STK36Q9NRP7 1315 aa14.31□□□□□ -0.12
CDK5RAP3-222ENST00000581708 PFKFB2O60825 505 aa14.3□□□□□ -0.12
CDK5RAP3-222ENST00000581708 XBP1P17861 261 aa14.3□□□□□ -0.12
CDK5RAP3-222ENST00000581708 STAT5BP51692 787 aa14.3□□□□□ -0.12
CDK5RAP3-222ENST00000581708 GRIN2CQ14957 1233 aa14.3□□□□□ -0.12
CDK5RAP3-222ENST00000581708 GRIK4Q16099 956 aa14.3□□□□□ -0.12
CDK5RAP3-222ENST00000581708 FAM160B1Q5W0V3 765 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms