RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 ALG1Q9BT22 464 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 RBM28Q9NW13 759 aaKnown RBP11.16□□□□□ -0.62
TOP3A-211ENST00000581536 PCDHA6Q9UN73 950 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 PCDHA8Q9Y5H6 950 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 EYSQ5T1H1 3165 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 FRMPD4Q14CM0 1322 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 SPATA31C2B4DYI2 1134 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 STXBP3O00186 592 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 DTNBO60941 627 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 ATP9AO75110 1047 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 METAP2P50579 478 aaKnown RBP eCLIP11.15□□□□□ -0.62
TOP3A-211ENST00000581536 ZNF200P98182 395 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-211ENST00000581536 TOB2Q14106 344 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-211ENST00000581536 DGKDQ16760 1214 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 TMEM240Q5SV17 173 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 GDF6Q6KF10 455 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-211ENST00000581536 ZNF365Q70YC5 407 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 RUFY3Q7L099 469 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 CYFIP1Q7L576 1253 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 EMID1Q96A84 441 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-211ENST00000581536 PHOX2BQ99453 314 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 NOC4LQ9BVI4 516 aaKnown RBP11.15□□□□□ -0.62
TOP3A-211ENST00000581536 AGXT2Q9BYV1 514 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 WNT8AQ9H1J5 351 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 HIPK3Q9H422 1215 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 MLXIPQ9HAP2 919 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 TMEM260Q9NX78 707 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 MYO9BQ13459 2157 aa11.15□□□□□ -0.62
TOP3A-211ENST00000581536 SMCO2A6NFE2 343 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 GRXCR1A8MXD5 290 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 ZNF286BP0CG31 522 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 TGFB3P10600 412 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 UBA1P22314 1058 aaKnown RBP11.14□□□□□ -0.63
TOP3A-211ENST00000581536 PDIA3P30101 505 aaKnown RBP11.14□□□□□ -0.63
TOP3A-211ENST00000581536 ICAM3P32942 547 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 NAPAP54920 295 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 PKN1Q16512 942 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 FAM109BQ6ICB4 259 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-211ENST00000581536 NFRKBQ6P4R8 1299 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 KCNV1Q6PIU1 500 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 TMEM199Q8N511 208 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 DEFB123Q8N688 67 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 PPTC7Q8NI37 304 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 CYP2W1Q8TAV3 490 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 PHKBQ93100 1093 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 FAM161BQ96MY7 647 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 SPATA33Q96N06 139 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 INPP4AQ96PE3 977 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-211ENST00000581536 CTAGE1Q96RT6 745 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 UPF3BQ9BZI7 483 aaKnown RBP11.14□□□□□ -0.63
TOP3A-211ENST00000581536 NCOA5Q9HCD5 579 aaKnown RBP11.14□□□□□ -0.63
TOP3A-211ENST00000581536 HDAC6Q9UBN7 1215 aa11.14□□□□□ -0.63
TOP3A-211ENST00000581536 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
TOP3A-211ENST00000581536 WDR81Q562E7 1941 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 HAS3O00219 553 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 PPFIA4O75335 1185 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 ITGB5P18084 799 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 PSMA5P28066 241 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 NTRK3Q16288 839 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 KIAA0753Q2KHM9 967 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 FBXL16Q8N461 479 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 RNPC3Q96LT9 517 aaKnown RBP11.13□□□□□ -0.63
TOP3A-211ENST00000581536 C16orf70Q9BSU1 422 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 SEZ6LQ9BYH1 1024 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 IL23AQ9NPF7 189 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 RIC8AQ9NPQ8 531 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 BARHL2Q9NY43 387 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
TOP3A-211ENST00000581536 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-211ENST00000581536 CHD9Q3L8U1 2897 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 LOXHD1Q8IVV2 1947 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 PRUNE2Q8WUY3 3088 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 PRPF3O43395 683 aaKnown RBP11.12□□□□□ -0.63
TOP3A-211ENST00000581536 FGBP02675 491 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 SUPT20HL2P0C7V6 817 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 PTPN5P54829 565 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 EVCP57679 992 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 SP4Q02446 784 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 STK3Q13188 491 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 PPIGQ13427 754 aaKnown RBP eCLIP11.12□□□□□ -0.632e-7■■■■□ 21.4
TOP3A-211ENST00000581536 GPNMBQ14956 572 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 PTGISQ16647 500 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 PFKFB3Q16875 520 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-211ENST00000581536 JAKMIP3Q5VZ66 844 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 NYAP1Q6ZVC0 841 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 DEFB128Q7Z7B8 93 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 DHX38Q92620 1227 aaKnown RBP11.12□□□□□ -0.63
TOP3A-211ENST00000581536 UIMC1Q96RL1 719 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 MTMR10Q9NXD2 777 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 CXXC1Q9P0U4 656 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-211ENST00000581536 UBIAD1Q9Y5Z9 338 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 CYP46A1Q9Y6A2 500 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 REV3LO60673 3130 aa11.12□□□□□ -0.63
TOP3A-211ENST00000581536 CDH23Q9H251 3354 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 PTPRSQ13332 1948 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 SPDYE3A6NKU9 549 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 FIBPO43427 364 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 EPB41L2O43491 1005 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms