RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 SOX10P56693 466 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 ACTR2P61160 394 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 NUCB2P80303 420 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 ATP2C1P98194 919 aaPredicted RBP17.05■□□□□ 0.32
MKS1-210ENST00000581180 SP4Q02446 784 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 SPIRE1Q08AE8 756 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 PPP2R5CQ13362 524 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 DGKDQ16760 1214 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 ABHD15Q6UXT9 468 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 UBE2Q1Q7Z7E8 422 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 DIS3LQ8TF46 1054 aaKnown RBP17.05■□□□□ 0.32
MKS1-210ENST00000581180 USP28Q96RU2 1077 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 FTOQ9C0B1 505 aaKnown RBP eCLIP17.05■□□□□ 0.32
MKS1-210ENST00000581180 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 CIZ1Q9ULV3 898 aaPredicted RBP17.05■□□□□ 0.32
MKS1-210ENST00000581180 IGKV6D-21A0A0A0MT36 114 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 KBTBD13C9JR72 458 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 LAD1O00515 517 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 KPNA6O60684 536 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 LGR5O75473 907 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 COL6A1P12109 1028 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 PURAQ00577 322 aaKnown RBP17.04■□□□□ 0.32
MKS1-210ENST00000581180 PTPAQ15257 358 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 SF3A1Q15459 793 aaKnown RBP17.04■□□□□ 0.32
MKS1-210ENST00000581180 SMAP1Q8IYB5 467 aaPredicted RBP17.04■□□□□ 0.32
MKS1-210ENST00000581180 KAT2BQ92831 832 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 PCYT2Q99447 389 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 C16orf70Q9BSU1 422 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 TTC12Q9H892 705 aaPredicted RBP17.04■□□□□ 0.32
MKS1-210ENST00000581180 CLIC4Q9Y696 253 aa17.04■□□□□ 0.32
MKS1-210ENST00000581180 EML1O00423 815 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 MARCH6O60337 910 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 BMP15O95972 392 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 LGALS2P05162 132 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 MYL3P08590 195 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 TCF7P36402 384 aaPredicted RBP17.03■□□□□ 0.32
MKS1-210ENST00000581180 PRPHP41219 470 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 TXKP42681 527 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 CXCL17Q6UXB2 119 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 RDM1Q8NG50 284 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 DISC1Q9NRI5 854 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 PCDHA12Q9UN75 941 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 PCDHA10Q9Y5I2 948 aa17.03■□□□□ 0.32
MKS1-210ENST00000581180 MORC2Q9Y6X9 1032 aaPredicted RBP17.03■□□□□ 0.32
MKS1-210ENST00000581180 EMSYQ7Z589 1322 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 A0A1W2PQ45 241 aaPredicted RBP17.02■□□□□ 0.32
MKS1-210ENST00000581180 A0A1W2PQY0 241 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 WDR64B1ANS9 1081 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 HAS3O00219 553 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 CABYRO75952 493 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 F2P00734 622 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 SUPT20HL2P0C7V6 817 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 ZNF286BP0CG31 522 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 SFNP31947 248 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 NASPP49321 788 aaPredicted RBP17.02■□□□□ 0.32
MKS1-210ENST00000581180 FXR2P51116 673 aaKnown RBP eCLIP17.02■□□□□ 0.32
MKS1-210ENST00000581180 JAK3P52333 1124 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 IL17AQ16552 155 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 ARL6IP4Q66PJ3 421 aaKnown RBP17.02■□□□□ 0.32
MKS1-210ENST00000581180 PAWRQ96IZ0 340 aaKnown RBP17.02■□□□□ 0.32
MKS1-210ENST00000581180 ZNF396Q96N95 335 aaPredicted RBP17.02■□□□□ 0.32
MKS1-210ENST00000581180 MTG1Q9BT17 334 aaPredicted RBP17.02■□□□□ 0.32
MKS1-210ENST00000581180 TCEAL9Q9UHQ7 104 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 CEP131Q9UPN4 1083 aa17.02■□□□□ 0.32
MKS1-210ENST00000581180 EVPLQ92817 2033 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 CHMP2AO43633 222 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 TECP42680 631 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
MKS1-210ENST00000581180 UTP14CQ5TAP6 766 aaKnown RBP17.01■□□□□ 0.31
MKS1-210ENST00000581180 ATL3Q6DD88 541 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 MIS18BP1Q6P0N0 1132 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
MKS1-210ENST00000581180 MIER3Q7Z3K6 550 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 TRIM50Q86XT4 487 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 CCDC60Q8IWA6 550 aaPredicted RBP17.01■□□□□ 0.31
MKS1-210ENST00000581180 AFAP1L1Q8TED9 768 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 FERMT2Q96AC1 680 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 C11orf49Q9H6J7 331 aa17.01■□□□□ 0.31
MKS1-210ENST00000581180 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
MKS1-210ENST00000581180 GRIN2DO15399 1336 aa17■□□□□ 0.31
MKS1-210ENST00000581180 MKI67P46013 3256 aaKnown RBP17■□□□□ 0.31
MKS1-210ENST00000581180 POTEMA6NI47 508 aa17■□□□□ 0.31
MKS1-210ENST00000581180 PSAPP07602 524 aa17■□□□□ 0.31
MKS1-210ENST00000581180 CEBPZQ03701 1054 aaKnown RBP17■□□□□ 0.31
MKS1-210ENST00000581180 DNM1Q05193 864 aaKnown RBP17■□□□□ 0.31
MKS1-210ENST00000581180 SLC39A14Q15043 492 aa17■□□□□ 0.31
MKS1-210ENST00000581180 EPHA7Q15375 998 aa17■□□□□ 0.31
MKS1-210ENST00000581180 PLPPR4Q7Z2D5 763 aa17■□□□□ 0.31
MKS1-210ENST00000581180 NECAB2Q7Z6G3 386 aa17■□□□□ 0.31
MKS1-210ENST00000581180 IGSF22Q8N9C0 903 aa17■□□□□ 0.31
MKS1-210ENST00000581180 LINC00301Q8NCQ3 95 aa17■□□□□ 0.31
MKS1-210ENST00000581180 GLT1D1Q96MS3 346 aa17■□□□□ 0.31
MKS1-210ENST00000581180 SENP6Q9GZR1 1112 aaPredicted RBP17■□□□□ 0.31
MKS1-210ENST00000581180 SMARCAD1Q9H4L7 1026 aa17■□□□□ 0.31
MKS1-210ENST00000581180 MAFBQ9Y5Q3 323 aaPredicted RBP17■□□□□ 0.31
MKS1-210ENST00000581180 IGSF9BQ9UPX0 1349 aa16.99■□□□□ 0.31
MKS1-210ENST00000581180 H3BRB1 525 aa16.99■□□□□ 0.31
MKS1-210ENST00000581180 ATP4AP20648 1035 aa16.99■□□□□ 0.31
MKS1-210ENST00000581180 PSEN2P49810 448 aa16.99■□□□□ 0.31
MKS1-210ENST00000581180 STAT5BP51692 787 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms