RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 RPS6KB1P23443 525 aa24.36■■□□□ 1.49
CSNK1D-216ENST00000581108 DEFB103AP81534 67 aa24.36■■□□□ 1.49
CSNK1D-216ENST00000581108 ZNF713Q8N859 430 aaPredicted RBP24.36■■□□□ 1.49
CSNK1D-216ENST00000581108 CYP2W1Q8TAV3 490 aa24.36■■□□□ 1.49
CSNK1D-216ENST00000581108 SEPT1Q8WYJ6 367 aa24.36■■□□□ 1.49
CSNK1D-216ENST00000581108 MXRA8Q9BRK3 442 aa24.36■■□□□ 1.49
CSNK1D-216ENST00000581108 CERS4Q9HA82 394 aa24.36■■□□□ 1.49
CSNK1D-216ENST00000581108 TMEM260Q9NX78 707 aa24.36■■□□□ 1.49
CSNK1D-216ENST00000581108 CCDC196A0A1B0GTZ2 297 aa24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 ABHD14A-ACY1A0A1B0GW23 586 aa24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 KIF28PB7ZC32 967 aa24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 ARHGEF15O94989 841 aa24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 FOSP01100 380 aaPredicted RBP24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 GNAT1P11488 350 aa24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 IKBKEQ14164 716 aa24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 COL25A1Q9BXS0 654 aaPredicted RBP24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 ANO3Q9BYT9 981 aa24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 KCNH7Q9NS40 1196 aa24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 VCANP13611 3396 aa24.35■■□□□ 1.49
CSNK1D-216ENST00000581108 TRANK1O15050 2925 aa24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 TLL1O43897 1013 aa24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 LGR5O75473 907 aa24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 CLK2P49760 499 aaKnown RBP24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 ADAM17P78536 824 aa24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 ARHGAP4P98171 946 aa24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 CCDC85BQ15834 202 aaPredicted RBP24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 PFKFB3Q16875 520 aaPredicted RBP24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 TEX2Q8IWB9 1127 aa24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 LMBR1Q8WVP7 490 aa24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 EMSYQ7Z589 1322 aa24.34■■□□□ 1.49
CSNK1D-216ENST00000581108 RFXAPO00287 272 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 NEFLP07196 543 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 ARP10275 920 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 PSMA5P28066 241 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 TAP1Q03518 808 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 FBXL16Q8N461 479 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 DBF4BQ8NFT6 615 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 ZBED2Q9BTP6 218 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 AGXT2Q9BYV1 514 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 OSBPL7Q9BZF2 842 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 PRDM6Q9NQX0 595 aa24.33■■□□□ 1.49
CSNK1D-216ENST00000581108 NRCAMQ92823 1304 aa24.33■■□□□ 1.48
CSNK1D-216ENST00000581108 CTSHP09668 335 aa24.32■■□□□ 1.48
CSNK1D-216ENST00000581108 SCG2P13521 617 aa24.32■■□□□ 1.48
CSNK1D-216ENST00000581108 MARK3P27448 753 aa24.32■■□□□ 1.48
CSNK1D-216ENST00000581108 GLG1Q92896 1179 aa24.32■■□□□ 1.48
CSNK1D-216ENST00000581108 GLT8D2Q9H1C3 349 aa24.32■■□□□ 1.48
CSNK1D-216ENST00000581108 JPH1Q9HDC5 661 aaPredicted RBP24.32■■□□□ 1.48
CSNK1D-216ENST00000581108 ERAP1Q9NZ08 941 aa24.32■■□□□ 1.48
CSNK1D-216ENST00000581108 MICAL3Q7RTP6 2002 aa24.32■■□□□ 1.48
CSNK1D-216ENST00000581108 LCHNA4D1U4 455 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 ADAMTS3O15072 1205 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 EFCAB14O75071 495 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 SREBF1P36956 1147 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 AP3B2Q13367 1082 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 PKN1Q16512 942 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 CEP55Q53EZ4 464 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 JAKMIP3Q5VZ66 844 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 PHKBQ93100 1093 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 SMARCAD1Q9H4L7 1026 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 SLC9A2Q9UBY0 812 aa24.31■■□□□ 1.48
CSNK1D-216ENST00000581108 REV3LO60673 3130 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 NID2Q14112 1375 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 EPOPA6NHQ4 379 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 MEIS1O00470 390 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 PRPF3O43395 683 aaKnown RBP24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 PPFIA3O75145 1194 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 CAND2O75155 1236 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 PPFIA1Q13136 1202 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 PLEKHG4Q58EX7 1191 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 FAM117BQ6P1L5 589 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 SPRED2Q7Z698 418 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 ARNTL2Q8WYA1 636 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 PCYT2Q99447 389 aa24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 PRRC2BQ5JSZ5 2229 aaKnown RBP24.3■■□□□ 1.48
CSNK1D-216ENST00000581108 GJB5O95377 273 aa24.29■■□□□ 1.48
CSNK1D-216ENST00000581108 ZNF76P36508 570 aa24.29■■□□□ 1.48
CSNK1D-216ENST00000581108 ITGB3BPQ13352 177 aaPredicted RBP24.29■■□□□ 1.48
CSNK1D-216ENST00000581108 RUFY4Q6ZNE9 571 aa24.29■■□□□ 1.48
CSNK1D-216ENST00000581108 SDF4Q9BRK5 362 aa24.29■■□□□ 1.48
CSNK1D-216ENST00000581108 ZMYND12Q9H0C1 365 aa24.29■■□□□ 1.48
CSNK1D-216ENST00000581108 AGO4Q9HCK5 861 aaKnown RBP24.29■■□□□ 1.48
CSNK1D-216ENST00000581108 NFASCO94856 1347 aa24.29■■□□□ 1.48
CSNK1D-216ENST00000581108 PDIA3P30101 505 aaKnown RBP24.28■■□□□ 1.48
CSNK1D-216ENST00000581108 ACTR2P61160 394 aa24.28■■□□□ 1.48
CSNK1D-216ENST00000581108 CCT2P78371 535 aaKnown RBP24.28■■□□□ 1.48
CSNK1D-216ENST00000581108 MKRN4PQ13434 485 aaPredicted RBP24.28■■□□□ 1.48
CSNK1D-216ENST00000581108 GRIK4Q16099 956 aa24.28■■□□□ 1.48
CSNK1D-216ENST00000581108 NTRK3Q16288 839 aa24.28■■□□□ 1.48
CSNK1D-216ENST00000581108 RUFY3Q7L099 469 aa24.28■■□□□ 1.48
CSNK1D-216ENST00000581108 RAD9AQ99638 391 aa24.28■■□□□ 1.48
CSNK1D-216ENST00000581108 ZSWIM6Q9HCJ5 1215 aa24.28■■□□□ 1.48
CSNK1D-216ENST00000581108 ESYT2A0FGR8 921 aa24.27■■□□□ 1.48
CSNK1D-216ENST00000581108 EPB41L2O43491 1005 aaKnown RBP24.27■■□□□ 1.48
CSNK1D-216ENST00000581108 EVCP57679 992 aa24.27■■□□□ 1.48
CSNK1D-216ENST00000581108 FAM26DQ5JW98 314 aa24.27■■□□□ 1.48
CSNK1D-216ENST00000581108 MARCH8Q5T0T0 291 aa24.27■■□□□ 1.48
CSNK1D-216ENST00000581108 SEPT8Q92599 483 aa24.27■■□□□ 1.48
CSNK1D-216ENST00000581108 AZI2Q9H6S1 392 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms