RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 SMCO2A6NFE2 343 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 NOP56O00567 594 aaKnown RBP12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 TREHO43280 583 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 FOSP01100 380 aaPredicted RBP12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 IFNAR1P17181 557 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 FGD1P98174 961 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 AP3B2Q13367 1082 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 ZNF618Q5T7W0 954 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 GIMAP8Q8ND71 665 aaPredicted RBP12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 PHKBQ93100 1093 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 MXRA8Q9BRK3 442 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 ZMYND12Q9H0C1 365 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 MTIF3Q9H2K0 278 aaKnown RBP12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 NCOA5Q9HCD5 579 aaKnown RBP12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 KCNH7Q9NS40 1196 aa12.12□□□□□ -0.47
SUPT4H1-204ENST00000580947 IGLV3-22A0A075B6J6 115 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 C17orf102A2RUQ5 167 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 MEIS1O00470 390 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 MAFGO15525 162 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 EDIL3O43854 480 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 ARP10275 920 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 MYOGP15173 224 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 TCF7P36402 384 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 RABGGTBP53611 331 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 SP4Q02446 784 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 ITGB3BPQ13352 177 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 RAB30Q15771 203 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 CEP55Q53EZ4 464 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 LMBR1Q8WVP7 490 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 ATP6V0A1Q93050 837 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 IL17RAQ96F46 866 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 PCYT2Q99447 389 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 OSBPL7Q9BZF2 842 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 UPF3BQ9BZI7 483 aaKnown RBP12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 GLT8D2Q9H1C3 349 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 NKX2-4Q9H2Z4 354 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 SETD4Q9NVD3 440 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 PCDHA11Q9Y5I1 949 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 NFASCO94856 1347 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
SUPT4H1-204ENST00000580947 RALGAPA2Q2PPJ7 1873 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 PPFIA3O75145 1194 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 LGR5O75473 907 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 BAIAP3O94812 1187 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 PARNO95453 639 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 CYP3A4P08684 503 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 ACTN1P12814 892 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 ARHGAP4P98171 946 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 UTP14CQ5TAP6 766 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 NIPA1Q7RTP0 329 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 PHOSPHO2Q8TCD6 241 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 SEPT1Q8WYJ6 367 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 SLC9A7Q96T83 725 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 EHMT1Q9H9B1 1298 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 AGO4Q9HCK5 861 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 PKD2L1Q9P0L9 805 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 ZNF215Q9UL58 517 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 CYP46A1Q9Y6A2 500 aa12.1□□□□□ -0.47
SUPT4H1-204ENST00000580947 KIAA1671Q9BY89 1806 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 MYO7AQ13402 2215 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 DHX15O43143 795 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 ARHGEF15O94989 841 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 CCNE2O96020 404 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 WDR5P61964 334 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 CCT2P78371 535 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 ADGRE1Q14246 886 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 MARCH8Q5T0T0 291 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 JAKMIP3Q5VZ66 844 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 CNKSR3Q6P9H4 555 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 HERC6Q8IVU3 1022 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 MAFAQ8NHW3 353 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 ZNF274Q96GC6 653 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 FTOQ9C0B1 505 aaKnown RBP eCLIP12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 JPH1Q9HDC5 661 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 MSRAQ9UJ68 235 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 COL4A6Q14031 1691 aa12.09□□□□□ -0.47
SUPT4H1-204ENST00000580947 IGKV6D-21A0A0A0MT36 114 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 MBLAC1A4D2B0 266 aaPredicted RBP12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 CAND2O75155 1236 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 ATG7O95352 703 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 FOSL2P15408 326 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 THPOP40225 353 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 ACTR2P61160 394 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 DEFB103AP81534 67 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 NPY5RQ15761 445 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 PLEKHG4Q58EX7 1191 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 FAM26DQ5JW98 314 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 RUFY4Q6ZNE9 571 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 RPAINQ86UA6 219 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 REXO1Q8N1G1 1221 aaKnown RBP12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 RASGRP4Q8TDF6 673 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 LENG9Q96B70 501 aa12.08□□□□□ -0.48
SUPT4H1-204ENST00000580947 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms