RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 EXOC6Q8TAG9 804 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 PABPC5Q96DU9 382 aaKnown RBP11.85□□□□□ -0.51
GGA3-210ENST00000580799 RRP36Q96EU6 259 aaKnown RBP11.85□□□□□ -0.51
GGA3-210ENST00000580799 CDHR1Q96JP9 859 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 LZTS2Q9BRK4 669 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 SENP2Q9HC62 589 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 RTEL1Q9NZ71 1219 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 SEC63Q9UGP8 760 aaKnown RBP11.85□□□□□ -0.51
GGA3-210ENST00000580799 RWDD3Q9Y3V2 267 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 PRR33A8MZF0 331 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 NCK2O43639 380 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 DDAH1O94760 285 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 RPLP2P05387 115 aaKnown RBP11.84□□□□□ -0.51
GGA3-210ENST00000580799 RB1P06400 928 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 GSPT1P15170 499 aaKnown RBP11.84□□□□□ -0.51
GGA3-210ENST00000580799 CHMLP26374 656 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
GGA3-210ENST00000580799 PTH1RQ03431 593 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 UTP14CQ5TAP6 766 aaKnown RBP11.84□□□□□ -0.51
GGA3-210ENST00000580799 RSPH3Q86UC2 560 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 FIBCD1Q8N539 461 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 IGDCC4Q8TDY8 1250 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 GPRASP2Q96D09 838 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 IL17RAQ96F46 866 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 MTA3Q9BTC8 594 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 OSBPL7Q9BZF2 842 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 LMAN2LQ9H0V9 348 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 NSUN3Q9H649 340 aaKnown RBP11.84□□□□□ -0.51
GGA3-210ENST00000580799 PRKAG3Q9UGI9 489 aa11.84□□□□□ -0.51
GGA3-210ENST00000580799 FAM86C2PA6NEL3 165 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 C5orf67F2Z3F1 127 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 MEIS2O14770 477 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 IL9P15248 144 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 TCF7P36402 384 aaPredicted RBP11.83□□□□□ -0.52
GGA3-210ENST00000580799 GNAQP50148 359 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 ANTXR2P58335 489 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 USP17L6PQ6QN14 398 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 ZNF654Q8IZM8 581 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 TMTC2Q8N394 836 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 C11orf84Q9BUA3 381 aaPredicted RBP11.83□□□□□ -0.52
GGA3-210ENST00000580799 EHMT1Q9H9B1 1298 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 ERAP1Q9NZ08 941 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 BAZ2BQ9UIF8 2168 aaKnown RBP11.83□□□□□ -0.52
GGA3-210ENST00000580799 ADGRA3Q8IWK6 1321 aa11.83□□□□□ -0.52
GGA3-210ENST00000580799 H3BQ06 376 aaPredicted RBP11.82□□□□□ -0.52
GGA3-210ENST00000580799 MAFGO15525 162 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 SGSM2O43147 1006 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 CHRNA1P02708 482 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 PDE4AP27815 886 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 CTNNB1P35222 781 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 BMPR1AP36894 532 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 SP4Q02446 784 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 PPFIA1Q13136 1202 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 TCEAL5Q5H9L2 206 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 MB21D2Q8IYB1 491 aaPredicted RBP11.82□□□□□ -0.52
GGA3-210ENST00000580799 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 LY9Q9HBG7 655 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 TUBE1Q9UJT0 475 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 TAF6LQ9Y6J9 622 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 KAT6AQ92794 2004 aa11.82□□□□□ -0.52
GGA3-210ENST00000580799 MBLAC1A4D2B0 266 aaPredicted RBP11.81□□□□□ -0.52
GGA3-210ENST00000580799 GHRP10912 638 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 KCNA2P16389 499 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 MGAT3Q09327 533 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 MTMR1Q13613 665 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 LPIN1Q14693 890 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 GRIK4Q16099 956 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 CSPP1Q1MSJ5 1256 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 CASC1Q6TDU7 716 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 TSHZ1Q6ZSZ6 1077 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 SEPT1Q8WYJ6 367 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 TNPO1Q92973 898 aaKnown RBP11.81□□□□□ -0.52
GGA3-210ENST00000580799 CLP1Q92989 425 aaKnown RBP11.81□□□□□ -0.52
GGA3-210ENST00000580799 SMARCAD1Q9H4L7 1026 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 PSTPIP2Q9H939 334 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 RC3H2Q9HBD1 1191 aaKnown RBP11.81□□□□□ -0.52
GGA3-210ENST00000580799 CLDND1Q9NY35 253 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 TELO2Q9Y4R8 837 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 SQORQ9Y6N5 450 aa11.81□□□□□ -0.52
GGA3-210ENST00000580799 ATG2AQ2TAZ0 1938 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 CCDC69A6NI79 296 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 RRN3P2A6NIE6 340 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 SPDYE3A6NKU9 549 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 RBAK-RBAKDNI3L0D1 243 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 ENPP3O14638 875 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 DCXO43602 365 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 ATP9AO75110 1047 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 LINC00271P0C7V0 271 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 CALM1P0DP23 149 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 CALM2P0DP24 149 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 CALM3P0DP25 149 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 ITGB5P18084 799 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 MCM5P33992 734 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 ZP2Q05996 745 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 BTG3Q14201 252 aaPredicted RBP11.8□□□□□ -0.52
GGA3-210ENST00000580799 CTC1Q2NKJ3 1217 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 FBXO47Q5MNV8 452 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 MARCH8Q5T0T0 291 aa11.8□□□□□ -0.52
GGA3-210ENST00000580799 RUFY4Q6ZNE9 571 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms