RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 MUTP22033 750 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 MARCKSP29966 332 aaPredicted RBP13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 UBA7P41226 1012 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 SLC26A2P50443 739 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 ARRDC4Q8NCT1 418 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 CCDC34Q96HJ3 373 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 FTOQ9C0B1 505 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 RNF208Q9H0X6 261 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 DISC1Q9NRI5 854 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 GNEQ9Y223 722 aaKnown RBP13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 PCNTO95613 3336 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 MCM3APO60318 1980 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 WNT7AO00755 349 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 BACH1O14867 736 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 DHX15O43143 795 aaKnown RBP13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 DYNC1LI2O43237 492 aaPredicted RBP13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 PPFIA4O75335 1185 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 ARIH2O95376 493 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 CCL5P13501 91 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 CCND3P30281 292 aaPredicted RBP13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 GJA9P57773 515 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 ACTR2P61160 394 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 SP2Q02086 613 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 ARHGAP1Q07960 439 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 TRIM32Q13049 653 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 EPHA7Q15375 998 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 FSCN1Q16658 493 aaKnown RBP13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 ADALQ6DHV7 355 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 IGSF22Q8N9C0 903 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 TRPV1Q8NER1 839 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 CALML4Q96GE6 196 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 ZNF333Q96JL9 665 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 KATNAL1Q9BW62 490 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 UPF3AQ9H1J1 476 aaKnown RBP13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 UNC45AQ9H3U1 944 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 VAV3Q9UKW4 847 aa13.2□□□□□ -0.3
SNORD3C-201ENST00000580533 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 A6NJR5 290 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 KBTBD13C9JR72 458 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 CABYRO75952 493 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 P4HBP07237 508 aaKnown RBP13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 SUPT20HL2P0C7V6 817 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 CST5P28325 142 aaPredicted RBP13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 NKX3-2P78367 333 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 SP4Q02446 784 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 SNX29Q8TEQ0 813 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 FAM167AQ96KS9 214 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 GPR20Q99678 358 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 MCOLN1Q9GZU1 580 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 SMARCAD1Q9H4L7 1026 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 TUFT1Q9NNX1 390 aa13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 PAK6Q9NQU5 681 aaPredicted RBP13.19□□□□□ -0.3
SNORD3C-201ENST00000580533 EMSYQ7Z589 1322 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 SYNRGQ9UMZ2 1314 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 MOXD2PA6NHM9 499 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 ATG7O95352 703 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 MMP3P08254 477 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 MCM4P33991 863 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 TCF7P36402 384 aaPredicted RBP13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 CCT6AP40227 531 aaKnown RBP13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 PSMC5P62195 406 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 GNASQ5JWF2 1037 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 B3GNT9Q6UX72 402 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 ABHD15Q6UXT9 468 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 PLPPR4Q7Z2D5 763 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 AFG1LQ8WV93 481 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 GLG1Q92896 1179 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 CCDC43Q96MW1 224 aaKnown RBP13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 TSEN34Q9BSV6 310 aaKnown RBP13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 POLR3CQ9BUI4 534 aaPredicted RBP13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 UNC93B1Q9H1C4 597 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 ZSWIM4Q9H7M6 989 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 ZNF302Q9NR11 478 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 ERAP1Q9NZ08 941 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
SNORD3C-201ENST00000580533 POTEMA6NI47 508 aa13.17□□□□□ -0.3
SNORD3C-201ENST00000580533 CCNE2O96020 404 aa13.17□□□□□ -0.3
SNORD3C-201ENST00000580533 GJB1P08034 283 aa13.17□□□□□ -0.3
SNORD3C-201ENST00000580533 HOXD8P13378 290 aaPredicted RBP13.17□□□□□ -0.3
SNORD3C-201ENST00000580533 CMA1P23946 247 aa13.17□□□□□ -0.3
SNORD3C-201ENST00000580533 RPA1P27694 616 aa13.17□□□□□ -0.3
SNORD3C-201ENST00000580533 STAT5BP51692 787 aa13.17□□□□□ -0.3
SNORD3C-201ENST00000580533 UBE2HP62256 183 aa13.17□□□□□ -0.3
SNORD3C-201ENST00000580533 SPIRE1Q08AE8 756 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms