RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 RASEFQ8IZ41 740 aa16.61■□□□□ 0.25
SMARCE1-216ENST00000580419 PPP1R13LQ8WUF5 828 aa16.61■□□□□ 0.25
SMARCE1-216ENST00000580419 PIBF1Q8WXW3 757 aa16.61■□□□□ 0.25
SMARCE1-216ENST00000580419 WNT8BQ93098 351 aa16.61■□□□□ 0.25
SMARCE1-216ENST00000580419 ERAP1Q9NZ08 941 aa16.61■□□□□ 0.25
SMARCE1-216ENST00000580419 MBLAC1A4D2B0 266 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 TREHO43280 583 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 GTPBP6O43824 516 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 MYOGP15173 224 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 RXRAP19793 462 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 HSPA4P34932 840 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 CLK2P49760 499 aaKnown RBP16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 SLC26A2P50443 739 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 EVCP57679 992 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 HTRA4P83105 476 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 ZNF200P98182 395 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 SMARCAD1Q9H4L7 1026 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 BCAS3Q9H6U6 928 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 FAM217BQ9NTX9 383 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 BRPF3Q9ULD4 1205 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 INSL6Q9Y581 213 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 SQORQ9Y6N5 450 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 SIP14410 1827 aa16.6■□□□□ 0.25
SMARCE1-216ENST00000580419 TTC3P53804 2025 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 RRN3P2A6NIE6 340 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 ATP9AO75110 1047 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 REC8O95072 547 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 TCF7P36402 384 aaPredicted RBP16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 SREBF1P36956 1147 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 THPOP40225 353 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 ERVK-21P61565 698 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 MRPS5P82675 430 aaKnown RBP16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 AAK1Q2M2I8 961 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 ADCK5Q3MIX3 580 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 HEATR3Q7Z4Q2 680 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 CMTR1Q8N1G2 835 aaKnown RBP16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 SP7Q8TDD2 431 aaPredicted RBP16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 LMBR1Q8WVP7 490 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 SEPT8Q92599 483 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 SAMD11Q96NU1 681 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 ASB2Q96Q27 587 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 MXRA8Q9BRK3 442 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 LRRC2Q9BYS8 371 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 MTCH2Q9Y6C9 303 aa16.59■□□□□ 0.25
SMARCE1-216ENST00000580419 GSTTP1A0A1W2PQM5 241 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 MEIS1O00470 390 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 AMHP03971 560 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 IGFBP4P22692 258 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 NAPAP54920 295 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 PFKFB3Q16875 520 aaPredicted RBP16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 CEP55Q53EZ4 464 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 PLPPR4Q7Z2D5 763 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 RSPH3Q86UC2 560 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 FAM177A1Q8N128 213 aaPredicted RBP16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 DBF4BQ8NFT6 615 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 CRYGNQ8WXF5 182 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 ZFP91Q96JP5 570 aaPredicted RBP16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 JPH1Q9HDC5 661 aaPredicted RBP16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 KCNH7Q9NS40 1196 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 SETD4Q9NVD3 440 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 COG5Q9UP83 839 aa16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.24
SMARCE1-216ENST00000580419 STXBP3O00186 592 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 ATG7O95352 703 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 CYP3A4P08684 503 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 PSMA5P28066 241 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 ADCY7P51828 1080 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 DEFB103AP81534 67 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 TYW1BQ6NUM6 668 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 CCDC82Q8N4S0 544 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 TOP1MTQ969P6 601 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 TGS1Q96RS0 853 aaKnown RBP16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 ZBED2Q9BTP6 218 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 ZMYND12Q9H0C1 365 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 SLC9A2Q9UBY0 812 aa16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 MYH9P35579 1960 aaKnown RBP16.57■□□□□ 0.24
SMARCE1-216ENST00000580419 KLF18A0A0U1RQI7 1052 aa16.56■□□□□ 0.24
SMARCE1-216ENST00000580419 GOLGA8AA7E2F4 631 aa16.56■□□□□ 0.24
SMARCE1-216ENST00000580419 GOLGA8BA8MQT2 603 aa16.56■□□□□ 0.24
SMARCE1-216ENST00000580419 UBE2SQ16763 222 aa16.56■□□□□ 0.24
SMARCE1-216ENST00000580419 TRIM50Q86XT4 487 aa16.56■□□□□ 0.24
SMARCE1-216ENST00000580419 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
SMARCE1-216ENST00000580419 RALGAPA2Q2PPJ7 1873 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 IGKV6D-21A0A0A0MT36 114 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 SMCO2A6NFE2 343 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 SORBS3O60504 671 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 LPXNO60711 386 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 SCG2P13521 617 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 CDC27P30260 824 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 ARHGAP4P98171 946 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 PPFIA1Q13136 1202 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 TCTN1Q2MV58 587 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 BLOC1S2Q6QNY1 142 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 CCDC136Q96JN2 1154 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 TUBE1Q9UJT0 475 aa16.55■□□□□ 0.24
SMARCE1-216ENST00000580419 KDM3AQ9Y4C1 1321 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms